Evidence map›Paper›PMID 35709710›Full record

ArticleBlood cancer discovery2022

Convergent Clonal Evolution of Signaling Gene Mutations Is a Hallmark of Myelodysplastic Syndrome Progression.

Andrew J Menssen, Ajay Khanna, Christopher A Miller, Sridhar Nonavinkere Srivatsan, Gue Su Chang, Jin Shao, Joshua Robinson, Michele O'Laughlin, Catrina C Fronick, Robert S Fulton and 14 more

Open access · bronzeAbstract read
In one paragraph

Article in Blood cancer discovery, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
3.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 22 citations in OpenAlex.

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  12. Discovery of U2AF1 neoantigens in myeloid neoplasms.Journal for immunotherapy of cancer · 2023
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

24 authors at 2 institutions in 1 country.

Andrew J MenssenDivision of Oncology, Department of Internal Medicine, Washington University School of Medicine, St. Louis, Missouri.
Ajay KhannaDivision of Oncology, Department of Internal Medicine, Washington University School of Medicine, St. Louis, Missouri.
Christopher A MillerDivision of Oncology, Department of Internal Medicine, Washington University School of Medicine, St. Louis, Missouri.ORCID 0000-0003-4266-6700
Sridhar Nonavinkere SrivatsanDivision of Oncology, Department of Internal Medicine, Washington University School of Medicine, St. Louis, Missouri.
Gue Su ChangMcDonnell Genome Institute, Washington University School of Medicine, St. Louis, Missouri.
Jin ShaoDivision of Oncology, Department of Internal Medicine, Washington University School of Medicine, St. Louis, Missouri.
Joshua RobinsonDivision of Oncology, Department of Internal Medicine, Washington University School of Medicine, St. Louis, Missouri.
Michele O'LaughlinMcDonnell Genome Institute, Washington University School of Medicine, St. Louis, Missouri.
Catrina C FronickMcDonnell Genome Institute, Washington University School of Medicine, St. Louis, Missouri.ORCID 0000-0002-2766-9551
Robert S FultonMcDonnell Genome Institute, Washington University School of Medicine, St. Louis, Missouri.
Kimberly BrendelDivision of Oncology, Department of Internal Medicine, Washington University School of Medicine, St. Louis, Missouri.
Sharon E HeathDivision of Oncology, Department of Internal Medicine, Washington University School of Medicine, St. Louis, Missouri.
Raya SabaDivision of Oncology, Department of Internal Medicine, Washington University School of Medicine, St. Louis, Missouri.ORCID 0000-0002-5955-2390
John S WelchDivision of Oncology, Department of Internal Medicine, Washington University School of Medicine, St. Louis, Missouri.ORCID 0000-0001-6656-3672
David H SpencerDivision of Oncology, Department of Internal Medicine, Washington University School of Medicine, St. Louis, Missouri.ORCID 0000-0002-5314-3043
Jacqueline E PaytonSiteman Cancer Center, Washington University School of Medicine, St. Louis, Missouri.ORCID 0000-0001-8832-3661
Peter WesterveltDivision of Oncology, Department of Internal Medicine, Washington University School of Medicine, St. Louis, Missouri.
John F DiPersioDivision of Oncology, Department of Internal Medicine, Washington University School of Medicine, St. Louis, Missouri.
Daniel C LinkDivision of Oncology, Department of Internal Medicine, Washington University School of Medicine, St. Louis, Missouri.
Matthew J SchuelkeDivision of Biostatistics, Washington University School of Medicine in St. Louis, St. Louis, Missouri.
Meagan A JacobyDivision of Oncology, Department of Internal Medicine, Washington University School of Medicine, St. Louis, Missouri.
Eric J DuncavageSiteman Cancer Center, Washington University School of Medicine, St. Louis, Missouri.
Timothy J LeyDivision of Oncology, Department of Internal Medicine, Washington University School of Medicine, St. Louis, Missouri.ORCID 0000-0002-9913-0520
Matthew J WalterDivision of Oncology, Department of Internal Medicine, Washington University School of Medicine, St. Louis, Missouri.ORCID 0000-0002-7753-1091
Washington University in St. Louis · USJames S. McDonnell Foundation · US

Funding

Washington University Center for Cellular ImagingP30CA091842 · NCI · WASHINGTON UNIVERSITY · PI AIMEE S JAMES · 2001 to 2026
$128.0M
WU INSTITUTE OF CLINICAL AND TRANSLATIONAL SCIENCESUL1TR002345 · NCATS · WASHINGTON UNIVERSITY · PI William G. Powderly · 2017 to 2026
$97.8M
Specimen Acquistition and Expression ProfilingP01CA101937 · NCI · WASHINGTON UNIVERSITY · PI LINK, DANIEL C · 2003 to 2023
$58.8M
Targeting the Bone Marrow Microenvironment In Acute Lymphocytic LeukemiaP50CA171963 · NCI · WASHINGTON UNIVERSITY · PI Daniel C Link · 2013 to 2026
$31.6M
Molecular Pathogenesis of Acute Myeloid LeukemiaR35CA197561 · NCI · WASHINGTON UNIVERSITY · PI Timothy J. Ley · 2015 to 2026
$11.0M
Washington University Institute of Clinical and Translational Sciences (TL1)TL1TR002344 · NCATS · WASHINGTON UNIVERSITY · PI Jay F. Piccirillo · 2017 to 2026
$8.5M
COMPREHENSIVE INFORMATIC ANALYSES OF AML GENOMES AND EPIGENOMESR50CA211782 · NCI · WASHINGTON UNIVERSITY · PI Christopher A Miller · 2017 to 2026
$1.5M
TARGETED SINGLE-MOLECULE SEQUENCING ASSAY INCORPORATING MOLECULAR BARCODESR33CA217700 · NCI · WASHINGTON UNIVERSITY · PI DUNCAVAGE, ERIC J, WALTER, MATTHEW J · 2017 to 2019
$1.1M
NCATS NIH HHS TL1 TR002344NCATS NIH HHS UL1 TR002345NCI NIH HHS P01 CA101937NCI NIH HHS P30 CA091842NCI NIH HHS P50 CA171963NCI NIH HHS R33 CA217700NCI NIH HHS R35 CA197561NCI NIH HHS R50 CA211782
6 · The paper itself

Abstract

Progression from myelodysplastic syndromes (MDS) to secondary acute myeloid leukemia (AML) is associated with the acquisition and expansion of subclones. Our understanding of subclone evolution during progression, including the frequency and preferred order of gene mutation acquisition, remains incomplete. Sequencing of 43 paired MDS and secondary AML samples identified at least one signaling gene mutation in 44% of MDS and 60% of secondary AML samples, often below the level of standard sequencing detection. In addition, 19% of MDS and 47% of secondary AML patients harbored more than one signaling gene mutation, almost always in separate, coexisting subclones. Signaling gene mutations demonstrated diverse patterns of clonal evolution during disease progression, including acquisition, expansion, persistence, and loss of mutations, with multiple patterns often coexisting in the same patient. Multivariate analysis revealed that MDS patients who had a signaling gene mutation had a higher risk of AML progression, potentially providing a biomarker for progression. SIGNIFICANCE: Subclone expansion is a hallmark of progression from MDS to secondary AML. Subclonal signaling gene mutations are common at MDS (often at low levels), show complex and convergent patterns of clonal evolution, and are associated with future progression to secondary AML. See related article by Guess et al., p. 316 (33). See related commentary by Romine and van Galen, p. 270. This article is highlighted in the In This Issue feature, p. 265.

Indexed as

Leukemia, Myeloid, AcuteMyelodysplastic SyndromesNeoplasms, Second PrimaryClonal EvolutionDisease ProgressionHumansMutation

Identifiers

PMID35709710
PMCPMC9338759
OpenAlexW4283023056

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.