Evidence map›Paper›PMID 35708748›Full record

ArticleApplied microbiology and biotechnology2022

One-pot platform for rapid detecting virus utilizing recombinase polymerase amplification and CRISPR/Cas12a.

Yifan Xiong, Gaihua Cao, Xiaolong Chen, Jun Yang, Meimei Shi, Yu Wang, Fuping Nie, Danqun Huo, Changjun Hou

Abstract read
In one paragraph

Article in Applied microbiology and biotechnology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Article
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  3. Article
  4. Article
  5. Review
  6. CRISPR/Cas12a-Based One-Tube RT-RAA Assay for PoRV Genotyping.International journal of molecular sciences · 2025
    Article
  7. The establishment and optimization of aMicrobiology spectrum · 2025
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Rapid detection ofFrontiers in microbiology · 2024
    Article
  16. A rapid and ultra-sensitive dual readout platform forFrontiers in cellular and infection microbiology · 2024
    Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Yifan Xiong *Key Laboratory for Biorheological Science and Technology of Ministry of Education, State and Local Joint Engineering Laboratory for Vascular Implants, Bioengineering College of Chongqing University, Chongqing, 400044, People's Republic of China.
Gaihua Cao *Key Laboratory for Biorheological Science and Technology of Ministry of Education, State and Local Joint Engineering Laboratory for Vascular Implants, Bioengineering College of Chongqing University, Chongqing, 400044, People's Republic of China.
Xiaolong ChenKey Laboratory for Biorheological Science and Technology of Ministry of Education, State and Local Joint Engineering Laboratory for Vascular Implants, Bioengineering College of Chongqing University, Chongqing, 400044, People's Republic of China.
Jun YangState Key Laboratory of Cattle Diseases Detection (Chongqing), Chongqing Customs, Chongqing Customs Technology Center, Chongqing, 400020, People's Republic of China.
Meimei ShiState Key Laboratory of Cattle Diseases Detection (Chongqing), Chongqing Customs, Chongqing Customs Technology Center, Chongqing, 400020, People's Republic of China.
Yu WangState Key Laboratory of Cattle Diseases Detection (Chongqing), Chongqing Customs, Chongqing Customs Technology Center, Chongqing, 400020, People's Republic of China.
Fuping NieState Key Laboratory of Cattle Diseases Detection (Chongqing), Chongqing Customs, Chongqing Customs Technology Center, Chongqing, 400020, People's Republic of China. nie1626@163.com.
Danqun HuoKey Laboratory for Biorheological Science and Technology of Ministry of Education, State and Local Joint Engineering Laboratory for Vascular Implants, Bioengineering College of Chongqing University, Chongqing, 400044, People's Republic of China. huodq@cqu.edu.cn.ORCID http://orcid.org/0000-0001-8550-036X
Changjun HouKey Laboratory for Biorheological Science and Technology of Ministry of Education, State and Local Joint Engineering Laboratory for Vascular Implants, Bioengineering College of Chongqing University, Chongqing, 400044, People's Republic of China. houcj@cqu.edu.cn.

Funding

Chongqing Graduate Student Research Innovation Project No. CYB21070Chongqing Science and Technology Commission CSTC2015shmszxl20097Chongqing Technology Innovation and Application Development Special Project CSTC2019jscx-gksbX0132National Natural Science Foundation of China 81772290National Natural Science Foundation of China NO.31171684Research Project of Chongqing Customs 2020CQKY10Research Project of General Administration of Customs 2019HK029
6 · The paper itself

Abstract

The livestock industry has been deeply affected by African swine fever virus (ASFV) and Capripoxvirus (CaPV), which caused an enormous economic damage. It is emergent to develop a reliable detection method. Here, we developed a rapid, ultra-sensitive, and one-pot DNA detection method combining recombinase polymerase amplification (RPA) and CRISPR/Cas12a for ASFV and CaPV, named one-pot-RPA-Cas12a (OpRCas) platform. It had the virtue of both RPA and CRISPR/Cas12a, such as high amplification efficiency, constant temperature reaction, and strict target selectivity, which made diagnosis simplified, accurate and easy to be operated without expensive equipment. Meanwhile, the reagents of RPA and CRISPR/Cas12a were added to the lid and bottom of tube in one go, which overcame the incompatibility of two reactions and aerosol contamination. To save cost, we only need a quarter of the amount of regular RPA per reaction which is enough to achieve clinical diagnosis. The OpRCas platform was 10 to 100 times more sensitive than qPCR; the limit of detection (LOD) was as low as 1.2 × 10

Indexed as

African Swine Fever VirusRecombinasesAnimalsCRISPR-Cas SystemsNucleic Acid Amplification TechniquesNucleotidyltransferasesReal-Time Polymerase Chain ReactionSensitivity and SpecificitySwineNucleotidyltransferasesRecombinasesAfrican swine fever virus (ASFV)Capripoxvirus (CaPV)CRISPR/Cas12aLateral flow assay (LFA)Recombinase polymerase amplification (RPA)

Identifiers

PMID35708748
PMCPMC9201268

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.