Evidence map›Paper›PMID 35708645›Full record

ArticleJournal of biochemistry2022

Novel small synthetic HIV-1 V3 crown variants: CCR5 targeting ligands.

Anju Krishnan Anitha, Pratibha Narayanan, Neethu Ajayakumar, Krishnankutty Chandrika Sivakumar, Kesavakurup Santhosh Kumar

Open access · bronzeAbstract read
In one paragraph

Article in Journal of biochemistry, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.1field-weighted citation impact, top 62% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Anju Krishnan AnithaChemical Biology Laboratory, Pathogen Biology Research Program, Rajiv Gandhi Centre for Biotechnology, Thiruvananthapuram 695014, India.
Pratibha NarayananChemical Biology Laboratory, Pathogen Biology Research Program, Rajiv Gandhi Centre for Biotechnology, Thiruvananthapuram 695014, India.
Neethu AjayakumarChemical Biology Laboratory, Pathogen Biology Research Program, Rajiv Gandhi Centre for Biotechnology, Thiruvananthapuram 695014, India.
Krishnankutty Chandrika SivakumarChemical Biology Laboratory, Pathogen Biology Research Program, Rajiv Gandhi Centre for Biotechnology, Thiruvananthapuram 695014, India.
Kesavakurup Santhosh KumarChemical Biology Laboratory, Pathogen Biology Research Program, Rajiv Gandhi Centre for Biotechnology, Thiruvananthapuram 695014, India.
Rajiv Gandhi Centre for Biotechnology · INUniversity of Kerala · IN

Funding

Department of Biotechnology BT/PR8835/NDB/52/61/20072Kerala State Council for Science Technology and Environment
6 · The paper itself

Abstract

The CC chemokine receptor 5 (CCR5) antagonism represents a promising pharmacological strategy for therapeutic intervention as it plays a significant role in reducing the severity and progression of a wide range of pathological conditions. Here we designed and generated peptide ligands targeting the chemokine receptor, CCR5, that were derived from the critical interaction sites of the V3 crown domain of envelope protein glycoprotein gp120 (TRKSIHIGPGRAFYTTGEI) of HIV-1 using computational biology approach and the peptide sequence corresponding to this region was taken as the template peptide, designated as TMP-1. The peptide variants were synthesized by employing Fmoc chemistry using polymer support and were labelled with rhodamine B to study their interaction with the CCR5 receptor expressed on various cells. TMP-1 and TMP-2 were selected as the high-affinity ligands from in vitro receptor-binding assays. Specific receptor-binding experiments in activated peripheral blood mononuclear cells and HOS.CCR5 cells indicated that TMP-1 and TMP-2 had significant CCR5 specificity. Further, the functional analysis of TMP peptides using chemotactic migration assay showed that both peptides did not mediate the migration of responsive cells. Thus, template TMP-1 and TMP-2 represent promising CCR5 targeting peptide candidates.

Indexed as

HIV-1Receptors, CCR5Amino Acid SequenceLeukocytes, MononuclearLigandsPeptidesLigandsPeptidesReceptors, CCR5CCR5CCR5 antagonismgp120RANTESV3 crown

Identifiers

PMID35708645
PMCPMC9445593
OpenAlexW4283009786

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.