Evidence map›Paper›PMID 35705813›Full record

ArticleNature2022

Deciphering the immunopeptidome in vivo reveals new tumour antigens.

Alex M Jaeger, Lauren E Stopfer, Ryuhjin Ahn, Emma A Sanders, Demi A Sandel, William A Freed-Pastor, William M Rideout, Santiago Naranjo, Tim Fessenden, Kim B Nguyen and 9 more

Abstract read
In one paragraph

Article in Nature, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Computational modeling of human genetic variants in mice.bioRxiv : the preprint server for biology · 2025
    Article
  18. Article
  19. Article
  20. Article

4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Alex M JaegerDavid H. Koch Institute for Integrative Cancer Research, Cambridge, MA, USA.
Lauren E StopferDavid H. Koch Institute for Integrative Cancer Research, Cambridge, MA, USA.ORCID http://orcid.org/0000-0001-6984-3004
Ryuhjin AhnDavid H. Koch Institute for Integrative Cancer Research, Cambridge, MA, USA.ORCID http://orcid.org/0000-0001-9788-4401
Emma A SandersDavid H. Koch Institute for Integrative Cancer Research, Cambridge, MA, USA.
Demi A SandelDavid H. Koch Institute for Integrative Cancer Research, Cambridge, MA, USA.ORCID http://orcid.org/0000-0002-4095-2036
William A Freed-PastorDavid H. Koch Institute for Integrative Cancer Research, Cambridge, MA, USA.ORCID http://orcid.org/0000-0002-7377-2111
William M RideoutDavid H. Koch Institute for Integrative Cancer Research, Cambridge, MA, USA.
Santiago NaranjoDavid H. Koch Institute for Integrative Cancer Research, Cambridge, MA, USA.
Tim FessendenDavid H. Koch Institute for Integrative Cancer Research, Cambridge, MA, USA.
Kim B NguyenDavid H. Koch Institute for Integrative Cancer Research, Cambridge, MA, USA.
Peter S WinterDavid H. Koch Institute for Integrative Cancer Research, Cambridge, MA, USA.
Ryan E KohnDavid H. Koch Institute for Integrative Cancer Research, Cambridge, MA, USA.
Peter M K WestcottDavid H. Koch Institute for Integrative Cancer Research, Cambridge, MA, USA.ORCID http://orcid.org/0000-0001-9436-4857
Jason M SchenkelDavid H. Koch Institute for Integrative Cancer Research, Cambridge, MA, USA.
Sean-Luc ShanahanDavid H. Koch Institute for Integrative Cancer Research, Cambridge, MA, USA.
Alex K ShalekDavid H. Koch Institute for Integrative Cancer Research, Cambridge, MA, USA.ORCID http://orcid.org/0000-0001-5670-8778
Stefani SprangerDavid H. Koch Institute for Integrative Cancer Research, Cambridge, MA, USA.ORCID http://orcid.org/0000-0003-3257-4546
Forest M WhiteDavid H. Koch Institute for Integrative Cancer Research, Cambridge, MA, USA.ORCID http://orcid.org/0000-0002-1545-1651
Tyler JacksDavid H. Koch Institute for Integrative Cancer Research, Cambridge, MA, USA. tjacks@mit.edu.ORCID http://orcid.org/0000-0001-5785-8911

Funding

VIRUS PRODUCTION COREP30CA014051 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI Andreea O'Connell · 1985 to 2026
$93.9M
TRAINING GRANTS IN ENVIROMENTAL TOXICOLOGYT32ES007020 · NIEHS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI ESSIGMANN, JOHN M · 1985 to 2024
$13.1M
Elucidating the molecular and cellular mechanisms of immune evasion in pancreatic cancerK08CA259621 · NCI · DANA-FARBER CANCER INST · PI WILLIAM A FREED-PASTOR · 2022 to 2026
$1.1M
Exploring the impact of HSP90 inhibition on antigen presentation and anti-tumor immune responsesR00CA241072 · NCI · H. LEE MOFFITT CANCER CTR & RES INST · PI JAEGER, ALEX · 2022 to 2024
$742k
Exploring the impact of HSP90 inhibition on antigen presentation and anti-tumor immune responsesK99CA241072 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI JAEGER, ALEX · 2020 to 2021
$300k
Howard Hughes Medical InstituteNCI NIH HHS K08 CA259621NCI NIH HHS K99 CA241072NCI NIH HHS P30 CA014051NCI NIH HHS R00 CA241072NIEHS NIH HHS T32 ES007020
6 · The paper itself

Abstract

Immunosurveillance of cancer requires the presentation of peptide antigens on major histocompatibility complex class I (MHC-I) molecules

Indexed as

Antigens, NeoplasmPeptidesProteomicsAlveolar Epithelial CellsAnimalsAntigen PresentationCarcinoma, Pancreatic DuctalCD8-Positive T-LymphocytesHistocompatibility Antigens Class ILung NeoplasmsMicePancreatic NeoplasmsRNA, MessengerAntigens, NeoplasmHistocompatibility Antigens Class IPeptidesRNA, Messenger

Identifiers

PMID35705813
PMCPMC9945857

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.