Evidence map›Paper›PMID 35705588›Full record

ArticleScientific reports2022

A machine learning based model accurately predicts cellular response to electric fields in multiple cell types.

Brett Sargent, Mohammad Jafari, Giovanny Marquez, Abijeet Singh Mehta, Yao-Hui Sun, Hsin-Ya Yang, Kan Zhu, Roslyn Rivkah Isseroff, Min Zhao, Marcella Gomez

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
  2. Computational models in directed cell migration.Frontiers in cell and developmental biology · 2026
    Review
  3. Review
  4. Article
  5. 3D Printing-Based Hydrogel Dressings for Wound Healing.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Brett SargentDepartment of Applied Mathematics, University of California, Santa Cruz, CA, 95064, USA.
Mohammad JafariDepartment of Earth and Space Sciences, Columbus State University, Columbus, GA, 31907, USA.
Giovanny MarquezDepartment of Applied Mathematics, University of California, Santa Cruz, CA, 95064, USA.
Abijeet Singh MehtaDepartment of Dermatology, University of California, Davis, Sacramento, CA, 95816, USA.
Yao-Hui SunDepartment of Dermatology, University of California, Davis, Sacramento, CA, 95816, USA.
Hsin-Ya YangDepartment of Dermatology, University of California, Davis, Sacramento, CA, 95816, USA.
Kan ZhuDepartment of Dermatology, University of California, Davis, Sacramento, CA, 95816, USA.
Roslyn Rivkah IsseroffDepartment of Dermatology, University of California, Davis, Sacramento, CA, 95816, USA.
Min ZhaoDepartment of Dermatology, University of California, Davis, Sacramento, CA, 95816, USA.
Marcella GomezDepartment of Applied Mathematics, University of California, Santa Cruz, CA, 95064, USA. mgomez26@ucsc.edu.
University of California, Davis · USUniversity of California, Santa Cruz · USColumbus State University · US

Funding

Molecular Generators at Corneal Wounds Produce and regulate the Wound Electrical SignalsR01EY019101 · NEI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI ZHAO, MIN · 2010 to 2023
$5.2M
NEI NIH HHS R01 EY019101
6 · The paper itself

Abstract

Many cell types migrate in response to naturally generated electric fields. Furthermore, it has been suggested that the external application of an electric field may be used to intervene in and optimize natural processes such as wound healing. Precise cell guidance suitable for such optimization may rely on predictive models of cell migration, which do not generalize. Here, we present a machine learning model that can forecast directedness of cell migration given a timeseries of previous directedness and electric field values. This model is trained using time series galvanotaxis data of mammalian cranial neural crest cells obtained through time-lapse microscopy of cells cultured at 37 °C in a galvanotaxis chamber at ambient pressure. Next, we show that our modeling approach can be used for a variety of cell types and experimental conditions with very limited training data using transfer learning methods. We adapt the model to predict cell behavior for keratocytes (room temperature, ~ 18-20 °C) and keratinocytes (37 °C) under similar experimental conditions with a small dataset (~ 2-5 cells). Finally, this model can be used to perform in silico studies by simulating cell migration lines under time-varying and unseen electric fields. We demonstrate this by simulating feedback control on cell migration using a proportional-integral-derivative (PID) controller. This data-driven approach provides predictive models of cell migration that may be suitable for designing electric field based cellular control mechanisms for applications in precision medicine such as wound healing.

Indexed as

ElectricityKeratinocytesAnimalsCell MovementElectric StimulationMachine LearningMammalsWound Healing

Identifiers

PMID35705588
PMCPMC9200721
OpenAlexW4282968577

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.