Evidence map›Paper›PMID 35705574›Full record

ArticleNPJ biofilms and microbiomes2022

Microrheology of Pseudomonas aeruginosa biofilms grown in wound beds.

Minhaz Ur Rahman, Derek F Fleming, Liyun Wang, Kendra P Rumbaugh, Vernita D Gordon, Gordon F Christopher

Open access · goldAbstract read
In one paragraph

Article in NPJ biofilms and microbiomes, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Minhaz Ur RahmanDepartment of Mechanical Engineering, Whitacre College of Engineering, Texas Tech University, Lubbock, TX, USA.ORCID 0000-0001-7891-0723
Derek F FlemingDepartment of Surgery, Texas Tech University Health Sciences, Lubbock, TX, USA.ORCID 0000-0002-0054-904X
Liyun WangDepartment of Physics, Center for Nonlinear Dynamics, Interdisciplinary Life Sciences Graduate Programs, LaMontagne Center for Infectious Disease, The University of Texas at Austin, Austin, TX, USA.
Kendra P RumbaughDepartment of Surgery, Texas Tech University Health Sciences, Lubbock, TX, USA.
Vernita D GordonDepartment of Physics, Center for Nonlinear Dynamics, Interdisciplinary Life Sciences Graduate Programs, LaMontagne Center for Infectious Disease, The University of Texas at Austin, Austin, TX, USA.ORCID 0000-0002-5989-9378
Gordon F ChristopherDepartment of Mechanical Engineering, Whitacre College of Engineering, Texas Tech University, Lubbock, TX, USA. gordon.christopher@ttu.edu.
Texas Tech University · USThe University of Texas at Austin · US

Funding

Assessing the roles of biofilm structure and mechanics in pathogenic, persistent infectionsR01AI121500 · NIAID · UNIVERSITY OF TEXAS AT AUSTIN · PI GORDON, VERNITA DIANE · 2017 to 2020
$1.5M
Utilizing Glycoside Hydrolases to Degrade Biofilms in WoundsR21AI137462 · NIAID · TEXAS TECH UNIVERSITY HEALTH SCIS CENTER · PI RUMBAUGH, KENDRA P · 2019 to 2020
$286k
NIAID NIH HHS R01 AI121500NIAID NIH HHS R21 AI137462
6 · The paper itself

Abstract

A new technique was used to measure the viscoelasticity of in vivo Pseudomonas aeruginosa biofilms. This was done through ex vivo microrheology measurements of in vivo biofilms excised from mouse wound beds. To our knowledge, this is the first time that the mechanics of in vivo biofilms have been measured. In vivo results are then compared to typical in vitro measurements. Biofilms grown in vivo are more relatively elastic than those grown in a wound-like medium in vitro but exhibited similar compliance. Using various genetically mutated P. aeruginosa strains, it is observed that the contributions of the exopolysaccharides Pel, Psl, and alginate to biofilm viscoelasticity were different for the biofilms grown in vitro and in vivo. In vitro experiments with collagen containing medium suggest this likely arises from the incorporation of host material, most notably collagen, into the matrix of the biofilm when it is grown in vivo. Taken together with earlier studies that examined the in vitro effects of collagen on mechanical properties, we conclude that collagen may, in some cases, be the dominant contributor to biofilm viscoelasticity in vivo.

Indexed as

BiofilmsPseudomonas aeruginosaAnimalsCollagenMicePolysaccharides, BacterialViscoelastic SubstancesWounds and InjuriesCollagenPolysaccharides, BacterialViscoelastic Substances

Identifiers

PMID35705574
PMCPMC9200728
OpenAlexW4282982962

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.