Evidence map›Paper›PMID 35705568›Full record

ArticleScientific reports2022

Caecal microbiota composition of experimental inbred MHC-B lines infected with IBV differs according to genetics and vaccination.

Marion Borey, Bertrand Bed'Hom, Nicolas Bruneau, Jordi Estellé, Frederik Larsen, Fany Blanc, Marie-Hélène Pinard-van der Laan, Tina Dalgaard, Fanny Calenge

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

  1. Diet-vaccine interactions: SQM Iron andApplied and environmental microbiology · 2026
    Article
  2. Review
  3. Effect of interferon on broilers' fecal microbiome composition.Journal of advanced veterinary and animal research · 2025
    Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Marion BoreyINRAE, AgroParisTech, UMR GABI, Université Paris-Saclay, Jouy-en-Josas, France. marion.borey@inrae.fr.
Bertrand Bed'HomINRAE, AgroParisTech, UMR GABI, Université Paris-Saclay, Jouy-en-Josas, France.
Nicolas BruneauINRAE, AgroParisTech, UMR GABI, Université Paris-Saclay, Jouy-en-Josas, France.
Jordi EstelléINRAE, AgroParisTech, UMR GABI, Université Paris-Saclay, Jouy-en-Josas, France.
Frederik LarsenDepartment of Animal Science, Aarhus University, Blichers allé 20, 8830, Tjele, Denmark.
Fany BlancINRAE, AgroParisTech, UMR GABI, Université Paris-Saclay, Jouy-en-Josas, France.
Marie-Hélène Pinard-van der LaanINRAE, AgroParisTech, UMR GABI, Université Paris-Saclay, Jouy-en-Josas, France.
Tina DalgaardDepartment of Animal Science, Aarhus University, Blichers allé 20, 8830, Tjele, Denmark.
Fanny CalengeINRAE, AgroParisTech, UMR GABI, Université Paris-Saclay, Jouy-en-Josas, France. fanny.calenge@inrae.fr.
AgroParisTech · FRAarhus University · DKCentre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Interactions between the gut microbiota and the immune system may be involved in vaccine and infection responses. In the present study, we studied the interactions between caecal microbiota composition and parameters describing the immune response in six experimental inbred chicken lines harboring different MHC haplotypes. Animals were challenge-infected with the infectious bronchitis virus (IBV), and half of them were previously vaccinated against this pathogen. We explored to what extent the gut microbiota composition and the genetic line could be related to the immune response, evaluated through flow cytometry. To do so, we characterized the caecal bacterial communities with a 16S rRNA gene amplicon sequencing approach performed one week after the IBV infectious challenge. We observed significant effects of both the vaccination and the genetic line on the microbiota after the challenge infection with IBV, with a lower bacterial richness in vaccinated chickens. We also observed dissimilar caecal community profiles among the different lines, and between the vaccinated and non-vaccinated animals. The effect of vaccination was similar in all the lines, with a reduced abundance of OTU from the Ruminococcacea UCG-014 and Faecalibacterium genera, and an increased abundance of OTU from the Eisenbergiella genus. The main association between the caecal microbiota and the immune phenotypes involved TCR

Indexed as

Coronavirus InfectionsInfectious bronchitis virusMicrobiotaPoultry DiseasesViral VaccinesAnimalsChickensReceptors, Antigen, T-CellRNA, Ribosomal, 16SVaccinationReceptors, Antigen, T-CellRNA, Ribosomal, 16SViral Vaccines

Identifiers

PMID35705568
PMCPMC9199466
OpenAlexW4282937000

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.