Evidence map›Paper›PMID 35703609›Full record

ArticleRevista do Instituto de Medicina Tropical de Sao Paulo2022

Identification of α-L-fucosidase (ALFuc) of Blastocystis sp. subtypes ST1, ST2 and ST3.

Joel Martínez-Ocaña, Williams Arony Martínez-Flores, Angélica Olivo-Díaz, Mirza Romero-Valdovinos, Fernando Martínez-Hernández, Guillermo Aguilar-Osorio, Ana Flisser, Pablo Maravilla

Open access · diamondAbstract read
In one paragraph

Article in Revista do Instituto de Medicina Tropical de Sao Paulo, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.4field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Joel Martínez-OcañaHospital General "Dr. Manuel Gea Gonzalez", Departamento de Ecología de Agentes Patógenos, Ciudad de México, México.ORCID http://orcid.org/0000-0002-2189-749X
Williams Arony Martínez-FloresHospital General "Dr. Manuel Gea Gonzalez", Departamento de Ecología de Agentes Patógenos, Ciudad de México, México.ORCID http://orcid.org/0000-0002-9240-8905
Angélica Olivo-DíazHospital General "Dr. Manuel Gea Gonzalez", Departamento de Ecología de Agentes Patógenos, Ciudad de México, México.ORCID http://orcid.org/0000-0003-0492-1504
Mirza Romero-ValdovinosHospital General "Dr. Manuel Gea Gonzalez", Departamento de Ecología de Agentes Patógenos, Ciudad de México, México.ORCID http://orcid.org/0000-0003-0522-8357
Fernando Martínez-HernándezHospital General "Dr. Manuel Gea Gonzalez", Departamento de Ecología de Agentes Patógenos, Ciudad de México, México.
Guillermo Aguilar-OsorioUniversidad Autonoma de México, Instituto de Química, Ciudad de México, México.
Ana FlisserUniversidad Autonoma de México, Facultad de Medicina, Departamento de Microbiologia y Parasitologia, Ciudad de México, México.ORCID http://orcid.org/0000-0002-1744-8480
Pablo MaravillaHospital General "Dr. Manuel Gea Gonzalez", Departamento de Ecología de Agentes Patógenos, Ciudad de México, México.ORCID http://orcid.org/0000-0003-2534-9447
Hospital General Dr. Manuel Gea Gonzalez · MXUniversidad Nacional Autónoma de México · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Blastocystis sp. is a common intestinal microorganism. The α-L-fucosidase (ALFuc) is an enzyme long associated with the colonization of the gut microbiota. However, this enzyme has not been experimentally identified in Blastocystis cultures. The objective of the present study was to identify ALFuc in supernatants of axenic cultures of Blastocystis subtype (ST)1 ATCC-50177 and ATCC-50610 and to compare predicted ALFuc proteins of alfuc genes in sequenced STs1-3 isolates in human Blastocystis carriers. Excretion/secretion (Es/p) and cell lysate proteins were obtained by processing Blastocystis ATCC cultures and submitting them to SDS-PAGE and immunoblotting. In addition, 18 fecal samples from symptomatic Blastocystis human carriers were analyzed by sequencing of amplification products for subtyping. A complete identification of the alfuc gene and phylogenetic analysis were performed. Immunoblotting showed that the amplified band corresponding to ALFuc (~51 kDa) was recognized only in the ES/p. Furthermore, prediction analysis of ALFuc 3D structures revealed that the domain α-L-fucosidase and the GH29 family's catalytic sites were conserved; interestingly, the galactose-binding domain was recognized only in ST1 and ST2. The phylogenetic inferences of ALFuc showed that STs1-3 were clearly identifiable and grouped into specific clusters. Our results show, for the first time through experimental data that ALFuc is a secretion product of Blastocystis sp., which could have a relevant role during intestinal colonization; however, further studies are required to clarify this condition. Furthermore, the alfuc gene is a promising candidate for a phylogenetic marker, as it shows a conserved classification with the SSU-rDNA gene.

Indexed as

BlastocystisBlastocystis Infectionsalpha-L-FucosidaseDNA, ProtozoanFecesGenetic VariationHumansPhylogenyalpha-L-FucosidaseDNA, Protozoan

Identifiers

PMID35703609
PMCPMC9190516
OpenAlexW4285270673

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.