Evidence map›Paper›PMID 35703437›Full record

ArticlemSystems2022

Implementation of Practical Surface SARS-CoV-2 Surveillance in School Settings.

Victor J Cantú, Pedro Belda-Ferre, Rodolfo A Salido, Rebecca Tsai, Brett Austin, William Jordan, Menka Asudani, Amanda Walster, Celestine G Magallanes, Holly Valentine and 27 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in mSystems, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

37 authors.

Victor J CantúDepartment of Bioengineering, University of California San Diegogrid.266100.3, La Jolla, California, USA.
Pedro Belda-FerreDepartment of Pediatrics, University of California San Diego, La Jolla, California, USA.
Rodolfo A SalidoDepartment of Bioengineering, University of California San Diegogrid.266100.3, La Jolla, California, USA.ORCID 0000-0003-0631-2817
Rebecca TsaiDepartment of Pediatrics, University of California San Diego, La Jolla, California, USA.
Brett AustinSan Diego County Public Health Lab, San Diego, California, USA.
William JordanSan Diego County Public Health Lab, San Diego, California, USA.
Menka AsudaniSan Diego County Public Health Lab, San Diego, California, USA.
Amanda WalsterSan Diego County Public Health Lab, San Diego, California, USA.
Celestine G MagallanesDepartment of Obstetrics, Gynecology, and Reproductive Sciences, University of California San Diego, La Jolla, California, USA.
Holly ValentineDepartment of Obstetrics, Gynecology, and Reproductive Sciences, University of California San Diego, La Jolla, California, USA.
Araz ManjoonianHerbert Wertheim School of Public Health, University of California San Diego, La Jolla, California, USA.
Carrissa WijayaHerbert Wertheim School of Public Health, University of California San Diego, La Jolla, California, USA.
Vinton OmalekiHerbert Wertheim School of Public Health, University of California San Diego, La Jolla, California, USA.
Karenina SandersDepartment of Pediatrics, University of California San Diego, La Jolla, California, USA.
Stefan AignerExpedited COVID Identification Environment (EXCITE) Laboratory, Department of Pediatrics, University of California San Diego, La Jolla, California, USA.
Nathan A BaerExpedited COVID Identification Environment (EXCITE) Laboratory, Department of Pediatrics, University of California San Diego, La Jolla, California, USA.
Maryann BettyDepartment of Pediatrics, University of California San Diego, La Jolla, California, USA.
Anelizze Castro-MartínezExpedited COVID Identification Environment (EXCITE) Laboratory, Department of Pediatrics, University of California San Diego, La Jolla, California, USA.
Willi CheungExpedited COVID Identification Environment (EXCITE) Laboratory, Department of Pediatrics, University of California San Diego, La Jolla, California, USA.
Evelyn S CresciniExpedited COVID Identification Environment (EXCITE) Laboratory, Department of Pediatrics, University of California San Diego, La Jolla, California, USA.
Peter De HoffExpedited COVID Identification Environment (EXCITE) Laboratory, Department of Pediatrics, University of California San Diego, La Jolla, California, USA.
Emily EisnerExpedited COVID Identification Environment (EXCITE) Laboratory, Department of Pediatrics, University of California San Diego, La Jolla, California, USA.
Abbas HakimExpedited COVID Identification Environment (EXCITE) Laboratory, Department of Pediatrics, University of California San Diego, La Jolla, California, USA.
Bhavika KapadiaExpedited COVID Identification Environment (EXCITE) Laboratory, Department of Pediatrics, University of California San Diego, La Jolla, California, USA.
Alma L LastrellaExpedited COVID Identification Environment (EXCITE) Laboratory, Department of Pediatrics, University of California San Diego, La Jolla, California, USA.
Elijah S LawrenceExpedited COVID Identification Environment (EXCITE) Laboratory, Department of Pediatrics, University of California San Diego, La Jolla, California, USA.
Toan T NgoExpedited COVID Identification Environment (EXCITE) Laboratory, Department of Pediatrics, University of California San Diego, La Jolla, California, USA.
Tyler OstranderExpedited COVID Identification Environment (EXCITE) Laboratory, Department of Pediatrics, University of California San Diego, La Jolla, California, USA.
Shashank SatheExpedited COVID Identification Environment (EXCITE) Laboratory, Department of Pediatrics, University of California San Diego, La Jolla, California, USA.
Phoebe SeaverExpedited COVID Identification Environment (EXCITE) Laboratory, Department of Pediatrics, University of California San Diego, La Jolla, California, USA.
Elizabeth W SmootExpedited COVID Identification Environment (EXCITE) Laboratory, Department of Pediatrics, University of California San Diego, La Jolla, California, USA.
Aaron F CarlinDivision of Infectious Diseases and Global Public Health, Department of Medicine, University of California San Diego, La Jolla, California, USA.ORCID 0000-0002-1669-8066
Gene W YeoExpedited COVID Identification Environment (EXCITE) Laboratory, Department of Pediatrics, University of California San Diego, La Jolla, California, USA.
Louise C LaurentDepartment of Obstetrics, Gynecology, and Reproductive Sciences, University of California San Diego, La Jolla, California, USA.
Anna Liza ManlutacSan Diego County Public Health Lab, San Diego, California, USA.
Rebecca Fielding-MillerHerbert Wertheim School of Public Health, University of California San Diego, La Jolla, California, USA.
Rob KnightDepartment of Bioengineering, University of California San Diegogrid.266100.3, La Jolla, California, USA.ORCID 0000-0002-0975-9019

Funding

Mapping host-microbe-metabolite interactions in 3D to find diet-derived enhancers of immunityDP1AT010885 · NCCIH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI KNIGHT, ROB · 2019 to 2023
$5.5M
SASEAU01HD108787 · NICHD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI FIELDING-MILLER, REBECCA KATHLEEN · 2022 to 2023
$2.4M
Deconvolution of pro- and anti-viral responses to Dengue virus and Zika Virus infectionsK08AI130381 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI CARLIN, AARON F. · 2019 to 2023
$1.0M
Social-structural and spatial determinants of HIV testing and linkage to care among high risk women in TanzaniaK01MH112436 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI FIELDING-MILLER, REBECCA KATHLEEN · 2017 to 2021
$941k
NCCIH NIH HHS DP1 AT010885NIAID NIH HHS K08 AI130381NICHD NIH HHS U01 HD108787NIMHD NIH HHS L70 MD011114NIMH NIH HHS K01 MH112436
6 · The paper itself

Abstract

Surface sampling for SARS-CoV-2 RNA detection has shown considerable promise to detect exposure of built environments to infected individuals shedding virus who would not otherwise be detected. Here, we compare two popular sampling media (VTM and SDS) and two popular workflows (Thermo and PerkinElmer) for implementation of a surface sampling program suitable for environmental monitoring in public schools. We find that the SDS/Thermo pipeline shows superior sensitivity and specificity, but that the VTM/PerkinElmer pipeline is still sufficient to support surface surveillance in any indoor setting with stable cohorts of occupants (e.g., schools, prisons, group homes, etc.) and may be used to leverage existing investments in infrastructure.

Indexed as

COVID-19SARS-CoV-2AutomationChildHumansPandemicsRNA, ViralRNA, ViralCOVIDenvironmental samplingpublic healthqPCRSARS-CoV-2

Identifiers

PMID35703437
PMCPMC9426517

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.