Evidence map›Paper›PMID 35701993›Full record

ArticleMedical science monitor : international medical journal of experimental and clinical research2022

Differential circRNA and mRNA Expression Profiling During Osteogenic Differentiation in Rat Bone Marrow Mesenchymal Stem Cells.

Yuan Yao, Jialin Liu, Wenjing Zhang, Xiangzhen Han, Huiyu He, Xiaowei Ji

Open access · hybridAbstract read
In one paragraph

Article in Medical science monitor : international medical journal of experimental and clinical research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Yuan YaoDepartment of Prosthodontics, The First Affiliated Hospital of Xinjiang Medical University, Affiliated Stomatological Hospital of Xinjiang Medical University, Stomatology Research Institute of Xinjiang Uygur Autonomous Region, Urumqi, Xinjiang, China (mainland).
Jialin LiuDepartment of Oral Implantology, The Affiliated Stomatology Hospital of Southwest Medical University; Orofacial Reconstruction and Regeneration Laboratory, The Affiliated Stomatology Hospital of Southwest Medical University, Luzhou, Sichuan, China (mainland).
Wenjing ZhangDental Implant Center, The First People's Hospital of Xining, Xining, Qinghai, China (mainland).
Xiangzhen HanDepartment of Prosthodontics, The First Affiliated Hospital of Xinjiang Medical University, Affiliated Stomatological Hospital of Xinjiang Medical University, Stomatology Research Institute of Xinjiang Uygur Autonomous Region, Urumqi, Xinjiang, China (mainland).
Huiyu HeDepartment of Prosthodontics, The First Affiliated Hospital of Xinjiang Medical University, Affiliated Stomatological Hospital of Xinjiang Medical University, Stomatology Research Institute of Xinjiang Uygur Autonomous Region, Urumqi, Xinjiang, China (mainland).
Xiaowei JiDepartment of Prosthodontics, The First Affiliated Hospital of Xinjiang Medical University, Affiliated Stomatological Hospital of Xinjiang Medical University, Stomatology Research Institute of Xinjiang Uygur Autonomous Region, Urumqi, Xinjiang, China (mainland).
Xinjiang Medical University · CNFirst Affiliated Hospital of Xinjiang Medical University · CNFirst People's Hospital of Nanning · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND Circular RNAs (circRNAs) play important roles in gene expression and signaling pathways. The study aimed to identify the differential expression of circRNAs and mRNAs in the osteogenic differentiation of rat bone marrow-derived mesenchymal stem cells (rBMSCs) and to explore the biological function of circRNAs in the osteogenic differentiation of rBMSCs. MATERIAL AND METHODS High-throughput sequencing was used to detect differentially expressed circular RNA and mRNA during osteogenic differentiation of rBMSCs. The RNAs were analyzed for Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment to predict their potential role in regulating rBMSC osteogenesis. MiRanda, Circatlas, and miRDB databases were used to predict target relationships between circRNA, miRNA, and mRNA.The regulatory network was constructed by Cytoscape (version 3.6.1). The RNA-Seq findings were validated by quantitative real-time PCR (qRT-PCR). RESULTS The results revealed that 29 differentially expressed circRNAs and 2453 differentially expressed mRNAs were detected during the osteogenic differentiation of rBMSCs. Many differentially expressed circRNAs were closely related to osteogenic differentiation of cells. Among them, circRNAs_1809 and Kitlg were the significantly increased circRNA and mRNA during osteogenic differentiation of rBMSCs. The ceRNA network showed that circRNA_1809 could target the Kitlg gene through miR-370-3p. CONCLUSIONS CircRNAs may play an important role in the osteogenic differentiation of rBMSCs. CircRNA_1809 may acts as a sponge for miR-370-3p and regulate the osteogenic differentiation of rBMSCs by targeting Kitlg; however, this hypothesis needs further verification. This study laid a theoretical foundation for further understanding the mechanism of circRNAs regulating osteogenic differentiation of rBMSCs.

Indexed as

Mesenchymal Stem CellsMicroRNAsAnimalsGene Expression ProfilingOsteogenesisRatsRNA, CircularRNA, MessengerMicroRNAsRNA, CircularRNA, Messenger

Identifiers

PMID35701993
PMCPMC9208303
OpenAlexW4281942399

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.