Evidence map›Paper›PMID 35699865›Full record

ArticleVisual computing for industry, biomedicine, and art2022

Vector textures derived from higher order derivative domains for classification of colorectal polyps.

Weiguo Cao, Marc J Pomeroy, Zhengrong Liang, Almas F Abbasi, Perry J Pickhardt, Hongbing Lu

Abstract read
In one paragraph

Article in Visual computing for industry, biomedicine, and art, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. On the Analyses of Medical Images Using Traditional Machine Learning Techniques and Convolutional Neural Networks.Archives of computational methods in engineering : state of the art reviews · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Weiguo CaoDepartment of Radiology, State University of New York at Stony Brook, Stony Brook, NY 11794, USA.
Marc J PomeroyDepartment of Radiology, State University of New York at Stony Brook, Stony Brook, NY 11794, USA.
Zhengrong LiangDepartment of Radiology, State University of New York at Stony Brook, Stony Brook, NY 11794, USA. jerome.liang@sunysb.edu.
Almas F AbbasiDepartment of Radiology, State University of New York at Stony Brook, Stony Brook, NY 11794, USA.
Perry J PickhardtDepartment of Radiology, University of Wisconsin Medical School, Madison, WI 53705, USA.
Hongbing LuDepartment of Biomedical Engineering, the Fourth Medical University, Xi'an, 710032, Shaanxi, China.

Funding

(PQ6) Radiogenomics of colorectal polyps to assess benign proliferative vs. premalignant states.R01CA220004 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI GRADY, WILLIAM MALLORY, HALBERG, RICHARD BROTT · 2017 to 2021
$3.2M
Advancing Virtual Colonoscopy for Early Cancer ScreeningR01CA206171 · NCI · STATE UNIVERSITY NEW YORK STONY BROOK · PI LIANG, JEROME Z · 2016 to 2020
$2.0M
National Natural Science Foundation of China 81871424NCI NIH HHS R01 CA206171NCI NIH HHS R01 CA220004NIH HHS CA206171NIH HHS CA220004
6 · The paper itself

Abstract

Textures have become widely adopted as an essential tool for lesion detection and classification through analysis of the lesion heterogeneities. In this study, higher order derivative images are being employed to combat the challenge of the poor contrast across similar tissue types among certain imaging modalities. To make good use of the derivative information, a novel concept of vector texture is firstly introduced to construct and extract several types of polyp descriptors. Two widely used differential operators, i.e., the gradient operator and Hessian operator, are utilized to generate the first and second order derivative images. These derivative volumetric images are used to produce two angle-based and two vector-based (including both angle and magnitude) textures. Next, a vector-based co-occurrence matrix is proposed to extract texture features which are fed to a random forest classifier to perform polyp classifications. To evaluate the performance of our method, experiments are implemented over a private colorectal polyp dataset obtained from computed tomographic colonography. We compare our method with four existing state-of-the-art methods and find that our method can outperform those competing methods over 4%-13% evaluated by the area under the receiver operating characteristics curves.

Indexed as

GradientHaralick featureHessian matrixImage textureMachine learningRandom forest

Identifiers

PMID35699865
PMCPMC9198194

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.