Evidence map›Paper›PMID 35699423›Full record

ArticleeLife2022

Niche-specific genome degradation and convergent evolution shaping

Stefano G Giulieri, Romain Guérillot, Sebastian Duchene, Abderrahman Hachani, Diane Daniel, Torsten Seemann, Joshua S Davis, Steven Y C Tong, Bernadette C Young, Daniel J Wilson and 2 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
4.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 52 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Metabolic reprogramming promotesMicrobiology (Reading, England) · 2026
    Article
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  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Review
  16. Article
  17. Review
  18. Antibiotics (Basel, Switzerland) · 2025
    Review
  19. Regulation of airway fumarate by host and pathogen promotesbioRxiv : the preprint server for biology · 2025
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 2 countries.

Stefano G GiulieriDepartment of Microbiology and Immunology at the Peter Doherty Institute for Infection and Immunity, University of Melbourne, Melbourne, Australia.
Romain GuérillotDepartment of Microbiology and Immunology at the Peter Doherty Institute for Infection and Immunity, University of Melbourne, Melbourne, Australia.
Sebastian DucheneDepartment of Microbiology and Immunology at the Peter Doherty Institute for Infection and Immunity, University of Melbourne, Melbourne, Australia.
Abderrahman HachaniDepartment of Microbiology and Immunology at the Peter Doherty Institute for Infection and Immunity, University of Melbourne, Melbourne, Australia.ORCID 0000-0001-8032-2154
Diane DanielDepartment of Microbiology and Immunology at the Peter Doherty Institute for Infection and Immunity, University of Melbourne, Melbourne, Australia.
Torsten SeemannMicrobiological Diagnostic Unit Public Health Laboratory, The University of Melbourne at the Doherty Institute for Infection and Immunity, Melbourne, Australia.
Joshua S DavisDepartment of Infectious Diseases, John Hunter Hospital, Newcastle, New South Wales, Australia.
Steven Y C TongMenzies School of Health Research, Charles Darwin University, Casuarina, Northern Territory, Australia.ORCID 0000-0002-1368-8356
Bernadette C YoungNuffield Department of medicine, Oxford, United Kingdom.ORCID 0000-0001-6071-6770
Daniel J WilsonBig Data Institute, Nuffield Department of Population Health, Li Ka Shing Centre for Health Information and Discovery, Old Road Campus, University of Oxford, Oxford, United Kingdom.ORCID 0000-0002-0940-3311
Timothy P StinearDepartment of Microbiology and Immunology at the Peter Doherty Institute for Infection and Immunity, University of Melbourne, Melbourne, Australia.ORCID 0000-0003-0150-123X
Benjamin P HowdenDepartment of Microbiology and Immunology at the Peter Doherty Institute for Infection and Immunity, University of Melbourne, Melbourne, Australia.ORCID 0000-0003-0237-1473
The University of Melbourne · AUThe Royal Melbourne Hospital · AUJohn Hunter Hospital · AUNuffield Health · GBPeter Doherty Institute · AUUniversity of Oxford · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

During severe infections,

Indexed as

Staphylococcal InfectionsStaphylococcus aureusAnti-Bacterial AgentsBacterial ProteinsHumansMutationAnti-Bacterial AgentsBacterial Proteinsadaptationgeneticsgenomicsinfectious diseasemicrobiologyStaphylococcus aureuswithin-host evolution

Identifiers

PMID35699423
PMCPMC9270034
OpenAlexW4282915115

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.