Evidence map›Paper›PMID 35693256›Full record

ArticleComputational and mathematical methods in medicine2022

Research on DNA-Binding Protein Identification Method Based on LSTM-CNN Feature Fusion.

Weizhong Lu, Xiaoyi Chen, Yu Zhang, Hongjie Wu, Yijie Ding, Jiawei Shen, Shixuan Guan, Haiou Li

Open access · hybridAbstract read
In one paragraph

Article in Computational and mathematical methods in medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.5field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 6 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Weizhong LuSchool of Electronic and Information Engineering, Suzhou University of Science and Technology, Suzhou 215009, China.
Xiaoyi ChenSchool of Electronic and Information Engineering, Suzhou University of Science and Technology, Suzhou 215009, China.ORCID https://orcid.org/0000-0002-8754-5489
Yu ZhangSuzhou Industrial Park Institute of Services Outsourcing, Suzhou 215123, China.
Hongjie WuSchool of Electronic and Information Engineering, Suzhou University of Science and Technology, Suzhou 215009, China.ORCID https://orcid.org/0000-0001-5921-8707
Yijie DingYangtze Delta Region Institute (Quzhou), University of Electronic Science and Technology of China, Quzhou, 324000, P.R, China.ORCID https://orcid.org/0000-0003-2911-7643
Jiawei ShenSchool of Electronic and Information Engineering, Suzhou University of Science and Technology, Suzhou 215009, China.
Shixuan GuanSchool of Electronic and Information Engineering, Suzhou University of Science and Technology, Suzhou 215009, China.
Haiou LiSchool of Electronic and Information Engineering, Suzhou University of Science and Technology, Suzhou 215009, China.
Suzhou University of Science and Technology · CNSuzhou Industrial Park Institute of Services Outsourcing · CNUniversity of Electronic Science and Technology of China · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Protein is closely related to life activities. As a kind of protein, DNA-binding protein plays an irreplaceable role in life activities. Therefore, it is very important to study DNA-binding protein, which is a subject worthy of study. Although traditional biotechnology has high precision, its cost and efficiency are increasingly unable to meet the needs of modern society. Machine learning methods can make up for the deficiencies of biological experimental techniques to a certain extent, but they are not as simple and fast as deep learning for data processing. In this paper, a deep learning framework based on parallel long and short-term memory(LSTM) and convolutional neural networks(CNN) was proposed to identify DNA-binding protein. This model can not only further extract the information and features of protein sequences, but also the features of evolutionary information. Finally, the two features are combined for training and testing. On the PDB2272 dataset, compared with PDBP_Fusion model, Accuracy(ACC) and Matthew's Correlation Coefficient (MCC) increased by 3.82% and 7.98% respectively. The experimental results of this model have certain advantages.

Indexed as

DNA-Binding ProteinsNeural Networks, ComputerAmino Acid SequenceHumansMachine LearningDNA-Binding Proteins

Identifiers

PMID35693256
PMCPMC9184165
OpenAlexW4281738116

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.