Evidence map›Paper›PMID 35690846›Full record

ArticleEnvironmental microbiome2022

In-depth characterization of denitrifier communities across different soil ecosystems in the tundra.

Igor S Pessi, Sirja Viitamäki, Anna-Maria Virkkala, Eeva Eronen-Rasimus, Tom O Delmont, Maija E Marushchak, Miska Luoto, Jenni Hultman

Abstract read
In one paragraph

Article in Environmental microbiome, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

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  19. "ISME communications · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Igor S PessiDepartment of Microbiology, University of Helsinki, Viikinkaari 9, 00014, Helsinki, Finland.
Sirja ViitamäkiDepartment of Microbiology, University of Helsinki, Viikinkaari 9, 00014, Helsinki, Finland.
Anna-Maria VirkkalaWoodwell Climate Research Center, 149 Woods Hole Road, Falmouth, MA, 02540-1644, USA.
Eeva Eronen-RasimusDepartment of Microbiology, University of Helsinki, Viikinkaari 9, 00014, Helsinki, Finland.
Tom O DelmontGénomique Métabolique, Genoscope, Institut François-Jacob, CEA, CNRS, Université d'Evry, Université Paris-Saclay, 91057, Evry, France.
Maija E MarushchakDepartment of Biological and Environmental Science, University of Jyväskylä, 40014, Jyväskylä, Finland.
Miska LuotoDepartment of Geosciences and Geography, University of Helsinki, Gustaf Hällströmin katu 2, 00014, Helsinki, Finland.
Jenni HultmanDepartment of Microbiology, University of Helsinki, Viikinkaari 9, 00014, Helsinki, Finland. jenni.hultman@helsinki.fi.ORCID http://orcid.org/0000-0002-3431-1785

Funding

Academy of Finland 286950Academy of Finland 314114Academy of Finland 314630Academy of Finland 317054Academy of Finland 335354Gordon and Betty Moore Foundation 8414
6 · The paper itself

Abstract

backgroundIn contrast to earlier assumptions, there is now mounting evidence for the role of tundra soils as important sources of the greenhouse gas nitrous oxide (N

resultsWe analysed 1.4 Tb of metagenomic data from soils in northern Finland covering a range of ecosystems from dry upland soils to water-logged fens and obtained 796 manually binned and curated metagenome-assembled genomes (MAGs). We then searched for MAGs harbouring genes involved in denitrification, an important process driving N

conclusionsBy coupling an in-depth characterization of microbial communities with in situ measurements of N

Indexed as

ArcticDenitrificationGenome-resolved metagenomicsNitrous oxide

Identifiers

PMID35690846
PMCPMC9188126

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.