Evidence map›Paper›PMID 35690828›Full record

ArticlePlant methods2022

Improved wood species identification based on multi-view imagery of the three anatomical planes.

Núbia Rosa da Silva, Victor Deklerck, Jan M Baetens, Jan Van den Bulcke, Maaike De Ridder, Mélissa Rousseau, Odemir Martinez Bruno, Hans Beeckman, Joris Van Acker, Bernard De Baets and 1 more

Abstract read
In one paragraph

Article in Plant methods, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

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0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

11 authors.

Núbia Rosa da SilvaKERMIT, Department of Data Analysis and Mathematical Modelling, Ghent University, Ghent, Belgium. nubia@ufcat.edu.br.ORCID http://orcid.org/0000-0003-1982-5144
Victor DeklerckRoyal Botanic Gardens Kew, Richmond, Surrey, UK.
Jan M BaetensKERMIT, Department of Data Analysis and Mathematical Modelling, Ghent University, Ghent, Belgium.
Jan Van den BulckeLaboratory of Wood Technology, Department of Environment, Ghent University, Ghent, Belgium.
Maaike De RidderService of Wood Biology, Royal Museum for Central Africa, Tervuren, Belgium.
Mélissa RousseauService of Wood Biology, Royal Museum for Central Africa, Tervuren, Belgium.
Odemir Martinez BrunoInstitute of Mathematics and Computer Science, University of São Paulo, São Carlos, Brazil.
Hans BeeckmanService of Wood Biology, Royal Museum for Central Africa, Tervuren, Belgium.
Joris Van AckerLaboratory of Wood Technology, Department of Environment, Ghent University, Ghent, Belgium.
Bernard De BaetsKERMIT, Department of Data Analysis and Mathematical Modelling, Ghent University, Ghent, Belgium.
Jan VerwaerenKERMIT, Department of Data Analysis and Mathematical Modelling, Ghent University, Ghent, Belgium.

Funding

Belspo Brain 2.0 B2/202/P2/SmartwoodID (Smart Classification of Congolese Timbers: deep learning techniques for enforcing forest conservation)Conselho Nacional de Desenvolvimento Científico e Tecnológico 308449/2010-0Conselho Nacional de Desenvolvimento Científico e Tecnológico 312718/2018-7Conselho Nacional de Desenvolvimento Científico e Tecnológico 484312/2013-8Fundação de Amparo à Pesquisa do Estado de São Paulo 2011/01523-1Fundação de Amparo à Pesquisa do Estado de São Paulo 2011/21467-9Fundação de Amparo à Pesquisa do Estado de São Paulo 2014/06208-5.World Forest ID DEFRA funded project 29084
6 · The paper itself

Abstract

backgroundThe identification of tropical African wood species based on microscopic imagery is a challenging problem due to the heterogeneous nature of the composition of wood combined with the vast number of candidate species. Image classification methods that rely on machine learning can facilitate this identification, provided that sufficient training material is available. Despite the fact that the three main anatomical sections contain information that is relevant for species identification, current methods only rely on transverse sections. Additionally, commonly used procedures for evaluating the performance of these methods neglect the fact that multiple images often originate from the same tree, leading to an overly optimistic estimate of the performance.

resultsWe introduce a new image dataset containing microscopic images of the three main anatomical sections of 77 Congolese wood species. A dedicated multi-view image classification method is developed and obtains an accuracy (computed using the naive but common approach) of 95%, outperforming the single-view methods by a large margin. An in-depth analysis shows that naive accuracy estimates can lead to a dramatic over-prediction, of up to 60%, of the accuracy.

conclusionsAdditional images from non-transverse sections can boost the performance of machine-learning-based wood species identification methods. Additionally, care should be taken when evaluating the performance of machine-learning-based wood species identification methods to avoid an overestimation of the performance.

Indexed as

Machine learningMachine visionTexture analysisWood anatomical sectionsWood species identification

Identifiers

PMID35690828
PMCPMC9188236

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.