Evidence map›Paper›PMID 35688133›Full record

ArticleCell2022

Counteracting chromatin effects of a splicing-correcting antisense oligonucleotide improves its therapeutic efficacy in spinal muscular atrophy.

Luciano E Marasco, Gwendal Dujardin, Rui Sousa-Luís, Ying Hsiu Liu, Jose N Stigliano, Tomoki Nomakuchi, Nick J Proudfoot, Adrian R Krainer, Alberto R Kornblihtt

Open access · greenAbstract read
In one paragraph

Article in Cell, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
10.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 71 citations in OpenAlex.

  1. Review
  2. RNA splicing in health and disease.Molecular biomedicine · 2026
    Review
  3. Direct roles of long non-coding RNAs in transcription activation.Nature structural & molecular biology · 2026
    Review
  4. Article
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  9. Review
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  12. Review
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  16. Review
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  18. Article
  19. In Search of Spinal Muscular Atrophy Disease Modifiers.International journal of molecular sciences · 2024
    Review
  20. A De Novo Splicing Mutation ofInternational journal of molecular sciences · 2024
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 4 countries.

Luciano E MarascoUniversidad de Buenos Aires (UBA), Facultad de Ciencias Exactas y Naturales, Departamento de Fisiología, Biología Molecular y Celular and CONICET-UBA, Instituto de Fisiología, Biología Molecular y Neurociencias (IFIBYNE), 1428 Buenos Aires, Argentina.
Gwendal DujardinSir William Dunn School of Pathology, University of Oxford, Oxford OX1 3RE, UK.
Rui Sousa-LuísInstituto de Medicina Molecular João Lobo Antunes, University of Lisbon, 1649-028 Lisboa, Portugal.
Ying Hsiu LiuCold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.
Jose N StiglianoUniversidad de Buenos Aires (UBA), Facultad de Ciencias Exactas y Naturales, Departamento de Fisiología, Biología Molecular y Celular and CONICET-UBA, Instituto de Fisiología, Biología Molecular y Neurociencias (IFIBYNE), 1428 Buenos Aires, Argentina.
Tomoki NomakuchiCold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.
Nick J ProudfootSir William Dunn School of Pathology, University of Oxford, Oxford OX1 3RE, UK.
Adrian R KrainerCold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.
Alberto R KornblihttUniversidad de Buenos Aires (UBA), Facultad de Ciencias Exactas y Naturales, Departamento de Fisiología, Biología Molecular y Celular and CONICET-UBA, Instituto de Fisiología, Biología Molecular y Neurociencias (IFIBYNE), 1428 Buenos Aires, Argentina. Electronic address: ark@fbmc.fcen.uba.ar.
Cold Spring Harbor Laboratory · USUniversidad de Buenos Aires · ARUniversity of Oxford · GBUniversity of Lisbon · PT

Funding

Single-Cell Biology Shared ResourceP30CA045508 · NCI · COLD SPRING HARBOR LABORATORY · PI John Edward Moses · 1987 to 2026
$118.9M
BIOCHEMISTRY OF PREMRNA SPLICINGR01GM042699 · NIGMS · COLD SPRING HARBOR LABORATORY · PI Adrian R Krainer · 1989 to 2026
$8.8M
Biochemistry of Pre-mRNA SplicingR37GM042699 · NIGMS · COLD SPRING HARBOR LABORATORY · PI KRAINER, ADRIAN R · 2012 to 2021
$7.7M
NCI NIH HHS P30 CA045508NIGMS NIH HHS R01 GM042699NIGMS NIH HHS R37 GM042699Wellcome TrustWellcome Trust 107928/Z/15/Z
6 · The paper itself

Abstract

Spinal muscular atrophy (SMA) is a motor-neuron disease caused by mutations of the SMN1 gene. The human paralog SMN2, whose exon 7 (E7) is predominantly skipped, cannot compensate for the lack of SMN1. Nusinersen is an antisense oligonucleotide (ASO) that upregulates E7 inclusion and SMN protein levels by displacing the splicing repressors hnRNPA1/A2 from their target site in intron 7. We show that by promoting transcriptional elongation, the histone deacetylase inhibitor VPA cooperates with a nusinersen-like ASO to promote E7 inclusion. Surprisingly, the ASO promotes the deployment of the silencing histone mark H3K9me2 on the SMN2 gene, creating a roadblock to RNA polymerase II elongation that inhibits E7 inclusion. By removing the roadblock, VPA counteracts the chromatin effects of the ASO, resulting in higher E7 inclusion without large pleiotropic effects. Combined administration of the nusinersen-like ASO and VPA in SMA mice strongly synergizes SMN expression, growth, survival, and neuromuscular function.

Indexed as

Muscular Atrophy, SpinalOligonucleotides, AntisenseAnimalsChromatinExonsMiceRNA SplicingChromatinOligonucleotides, Antisensealternative splicingantisense oligonucleotide therapychromatinhistone acetylationspinal muscular atrophytranscriptional elongation

Identifiers

PMID35688133
PMCPMC9555286
OpenAlexW4281780864

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.