Evidence map›Paper›PMID 35687150›Full record

ArticleArchives of microbiology2022

A high-throughput DNA sequencing study of fecal bacteria of seven Mexican horse breeds.

Fernando Hernández-Quiroz, Selvasankar Murugesan, Cintia Flores-Rivas, Alberto Piña-Escobedo, Josué Isaac Juárez-Hernández, Matilde García-Espitia, Alejandra Chávez-Carbajal, Khemlal Nirmalkar, Jaime García-Mena

Abstract read
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In one paragraph

Article in Archives of microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 4 countries.

Fernando Hernández-Quiroz *Departamento de Genética y Biología Molecular, Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional, Av IPN 2508 Col Zacatenco, CDMX, 07360, Ciudad de México, Mexico.
Selvasankar Murugesan *Departamento de Genética y Biología Molecular, Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional, Av IPN 2508 Col Zacatenco, CDMX, 07360, Ciudad de México, Mexico.
Cintia Flores-RivasDepartamento de Genética y Biología Molecular, Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional, Av IPN 2508 Col Zacatenco, CDMX, 07360, Ciudad de México, Mexico.
Alberto Piña-EscobedoDepartamento de Genética y Biología Molecular, Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional, Av IPN 2508 Col Zacatenco, CDMX, 07360, Ciudad de México, Mexico.
Josué Isaac Juárez-HernándezDepartamento de Genética y Biología Molecular, Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional, Av IPN 2508 Col Zacatenco, CDMX, 07360, Ciudad de México, Mexico.
Matilde García-EspitiaEscuela Nacional de Medicina y Homeopatía del Instituto Politécnico Nacional, Guillermo Massieu Helguera 239, CDMX, 07320, Ciudad de México, Mexico.
Alejandra Chávez-CarbajalDepartamento de Genética y Biología Molecular, Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional, Av IPN 2508 Col Zacatenco, CDMX, 07360, Ciudad de México, Mexico.
Khemlal NirmalkarDepartamento de Genética y Biología Molecular, Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional, Av IPN 2508 Col Zacatenco, CDMX, 07360, Ciudad de México, Mexico.
Jaime García-MenaDepartamento de Genética y Biología Molecular, Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional, Av IPN 2508 Col Zacatenco, CDMX, 07360, Ciudad de México, Mexico. jgmena@cinvestav.mx.ORCID http://orcid.org/0000-0002-0595-3711
Instituto Politécnico Nacional · MXArizona State University · USPopulation Health Research Institute · CAQatar Airways (Qatar) · QAUniversity of Nebraska–Lincoln · US

Funding

Consejo Nacional de Ciencia y Tecnología CONACyT 163235 INFR-2011-01Consejo Nacional de Ciencia y Tecnología FONSEC SS/IMSS/ISSSTE-CONACYT-233361
6 · The paper itself

Abstract

Horses are non-ruminant, herbivorous mammals, been used through history for various purposes, with a gut microbiota from cecum to the colon, possessing remarkable fermentative capacity. We studied the fecal microbiota of Azteca, Criollo, Frisian, Iberian, Pinto, Quarter and Spanish horse breeds living in Mexico by next-generation DNA sequencing of 16S rRNA gene libraries. Dominant phyla Firmicutes, Bacteroidetes, Proteobacteria, Spirochaetes, Fibrobacteres, Actinobacteria and Verrucomicrobia have different relative abundances among breeds, with contrasted alpha and beta diversities as well. Heatmap analysis revealed that Ruminococcaceae, Lachnospiraceae, Mogibacteriaceae families, and order Clostridiales are more abundant in Spanish, Azteca, Quarter and Criollo breeds. The LEfSe analysis displayed higher abundance of order Bacteroidales, family BS11, and genera Faecalibacterium, Comamonas, Collinsella, Acetobacter, and Treponema in Criollo, Azteca, Iberian, Spanish, Frisian, Pinto, and Quarter horse breeds. The conclusion is that dominant bacterial taxa, found in fecal samples of horse breeds living in Mexico, have different relative abundances.

Indexed as

ActinobacteriaBacteroidetesAnimalsEubacterialesFecesHigh-Throughput Nucleotide SequencingHorsesMammalsMexicoRNA, Ribosomal, 16SVerrucomicrobiaRNA, Ribosomal, 16SBacterial diversityFecal microbiotaHigh-throughput DNA sequencingHorse breedsIon Torrent

Identifiers

PMID35687150
OpenAlexW4282037312

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.