Evidence map›Paper›PMID 35686584›Full record

ArticleNanoscale2022

Differentiation and classification of bacterial endotoxins based on surface enhanced Raman scattering and advanced machine learning.

Yanjun Yang, Beibei Xu, James Haverstick, Nabil Ibtehaz, Artur Muszyński, Xianyan Chen, Muhammad E H Chowdhury, Susu M Zughaier, Yiping Zhao

Open access · greenAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Nanoscale, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 57 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Yanjun YangSchool of Electrical and Computer Engineering, College of Engineering, The University of Georgia, Athens, GA 30602, USA. YanjunYang@uga.edu.ORCID http://orcid.org/0000-0002-1822-7364
Beibei XuDepartment of Statistics, The University of Georgia, Athens, GA 30602, USA.
James HaverstickDepartment of Physics and Astronomy, The University of Georgia, Athens, GA 30602, USA. zhaoy@uga.edu.
Nabil IbtehazDepartment of Computer Science, Purdue University, West Lafayette, IN 47907, USA.ORCID http://orcid.org/0000-0003-3625-5972
Artur MuszyńskiComplex Carbohydrate Research Center, University of Georgia, Athens, GA 30602, USA.ORCID http://orcid.org/0000-0003-3497-9977
Xianyan ChenDepartment of Statistics, The University of Georgia, Athens, GA 30602, USA.
Muhammad E H ChowdhuryDepartment of Electrical Engineering, College of Engineering, Qatar University, PO. Box 2713, Doha, Qatar.
Susu M ZughaierDepartment of Basic Medical Sciences, College of Medicine, QU Health, Qatar University, PO. Box 2713, Doha, Qatar. szughaier@qu.edu.qa.ORCID http://orcid.org/0000-0001-7487-8770
Yiping ZhaoDepartment of Physics and Astronomy, The University of Georgia, Athens, GA 30602, USA. zhaoy@uga.edu.ORCID http://orcid.org/0000-0002-3710-4159
University of Georgia · USQatar University · QAPurdue University West Lafayette · US

Funding

National Glycoscience Resource- CCRC Service and Training - NGlycoR@CCRCR24GM137782 · NIGMS · UNIVERSITY OF GEORGIA · PI Parastoo Azadi · 2020 to 2026
$5.2M
NIGMS NIH HHS R24 GM137782
6 · The paper itself

Abstract

Bacterial endotoxin, a major component of the Gram-negative bacterial outer membrane leaflet, is a lipopolysaccharide shed from bacteria during their growth and infection and can be utilized as a biomarker for bacterial detection. Here, the surface enhanced Raman scattering (SERS) spectra of eleven bacterial endotoxins with an average detection amount of 8.75 pg per measurement have been obtained based on silver nanorod array substrates, and the characteristic SERS peaks have been identified. With appropriate spectral pre-processing procedures, different classical machine learning algorithms, including support vector machine, k-nearest neighbor, random forest,

Indexed as

NanotubesSpectrum Analysis, RamanBacteriaEndotoxinsMachine LearningSilverEndotoxinsSilver

Identifiers

PMID35686584
PMCPMC9575096
OpenAlexW4282926648

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.