Evidence map›Paper›PMID 35686495›Full record

ArticleThe journal of vascular access2024

Bioinformatics identifies predictors of arteriovenous fistula maturation.

Jia Liu, Dingyao Zhang, Anand Brahmandam, Yutaka Matsubara, Mingjie Gao, Jingru Tian, Bing Liu, Chang Shu, Alan Dardik

Open access · greenAbstract read
In one paragraph

Article in The journal of vascular access, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Increased expression of the P2YRenal failure · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Jia LiuDepartment of Vascular Surgery, The Second Xiangya Hospital, Central South University, Changsha, People's Republic of China.ORCID 0000-0002-1227-9489
Dingyao ZhangThe Stem Cell Center, Yale School of Medicine, New Haven, CT, USA.
Anand BrahmandamThe Vascular Biology and Therapeutics Program, Yale School of Medicine, New Haven, CT, USA.
Yutaka MatsubaraThe Vascular Biology and Therapeutics Program, Yale School of Medicine, New Haven, CT, USA.ORCID 0000-0002-9187-8403
Mingjie GaoThe Vascular Biology and Therapeutics Program, Yale School of Medicine, New Haven, CT, USA.
Jingru TianThe Stem Cell Center, Yale School of Medicine, New Haven, CT, USA.
Bing LiuThe Vascular Biology and Therapeutics Program, Yale School of Medicine, New Haven, CT, USA.
Chang ShuDepartment of Vascular Surgery, The Second Xiangya Hospital, Central South University, Changsha, People's Republic of China.
Alan DardikThe Vascular Biology and Therapeutics Program, Yale School of Medicine, New Haven, CT, USA.ORCID 0000-0001-5022-7367
Yale University · USCentral South University · CNYale Cancer Center · USKyushu University · JP

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Manipulating the matrix to improve arteriovenous fistula patencyR01HL144476 · NHLBI · YALE UNIVERSITY · PI Alan Dardik · 2019 to 2026
$5.6M
NCATS NIH HHS UL1 TR001863NHLBI NIH HHS R01 HL144476
6 · The paper itself

Abstract

backgroundArteriovenous fistulae (AVF) are the preferred access for hemodialysis but still have poor rates of maturation and patency limiting their clinical use. The underlying mechanisms of venous remodeling remain poorly understood, and only limited numbers of unbiased approaches have been reported.

methodsBiological Gene Ontology (GO) term enrichment analysis and differentially expressed genes (DEG) analysis were performed for three AVF datasets. A microRNA enrichment analysis and L1000CDS

resultsThe inflammatory and immune responses were activated during both early and late phases of AVF maturation, with upregulation of neutrophil and leukocyte regulation, cytokine production, and cytokine-mediated signaling. In men with failed AVF, negative regulation of myeloid-leukocyte differentiation and regulation of macrophage activation were significantly upregulated. Compared to non-diabetic patients, diabetic patients had significantly reduced immune response-related enrichment such as cell activation in immune response, regulation of immune-effector process, and positive regulation of defense response; in addition, diabetic patients showed no enrichment of the immune response-regulating signaling pathway.

conclusionsThese data show coordinated, and differential regulation of genes associated with AVF maturation, and different patterns of several pathways are associated with sex differences in AVF failure. Inflammatory and immune responses are activated during AVF maturation and diabetes may impair AVF maturation by altering these responses. These findings suggest several novel molecular targets to improve sex specific AVF maturation.

Indexed as

Arteriovenous Shunt, SurgicalDiabetes MellitusComputational BiologyCytokinesFemaleHumansMaleRenal DialysisVascular PatencyCytokinesArteriovenous fistulaediabetesGO for biological processesinflammationsex difference

Identifiers

PMID35686495
PMCPMC9734286
OpenAlexW4281725973

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.