Evidence map›Paper›PMID 35685788›Full record

ArticleChemical science2022

Polymer-based chemical-nose systems for optical-pattern recognition of gut microbiota.

Shunsuke Tomita, Hiroyuki Kusada, Naoshi Kojima, Sayaka Ishihara, Koyomi Miyazaki, Hideyuki Tamaki, Ryoji Kurita

Open access · diamondAbstract read
In one paragraph

Article in Chemical science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.6field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 31 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Shunsuke TomitaHealth and Medical Research Institute, National Institute of Advanced Industrial Science and Technology 1-1-1 Higashi Tsukuba Ibaraki 305-8566 Japan s.tomita@aist.go.jp r.kurita@aist.go.jp.ORCID https://orcid.org/0000-0002-0586-6976
Hiroyuki KusadaBioproduction Research Institute, National Institute of Advanced Industrial Science and Technology Japan.ORCID https://orcid.org/0000-0003-0563-2990
Naoshi KojimaHealth and Medical Research Institute, National Institute of Advanced Industrial Science and Technology 1-1-1 Higashi Tsukuba Ibaraki 305-8566 Japan s.tomita@aist.go.jp r.kurita@aist.go.jp.ORCID https://orcid.org/0000-0002-2896-0113
Sayaka IshiharaHealth and Medical Research Institute, National Institute of Advanced Industrial Science and Technology 1-1-1 Higashi Tsukuba Ibaraki 305-8566 Japan s.tomita@aist.go.jp r.kurita@aist.go.jp.
Koyomi MiyazakiCellular and Molecular Biotechnology Research Institute, National Institute of Advanced Industrial Science and Technology Japan.ORCID https://orcid.org/0000-0002-5464-1095
Hideyuki TamakiBioproduction Research Institute, National Institute of Advanced Industrial Science and Technology Japan.
Ryoji KuritaHealth and Medical Research Institute, National Institute of Advanced Industrial Science and Technology 1-1-1 Higashi Tsukuba Ibaraki 305-8566 Japan s.tomita@aist.go.jp r.kurita@aist.go.jp.ORCID https://orcid.org/0000-0001-5666-9561
National Institute of Advanced Industrial Science and Technology · JPUniversity of Tsukuba · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gut-microbiota analysis has been recognized as crucial in health management and disease treatment. Metagenomics, a current standard examination method for the gut microbiome, is effective but requires both expertise and significant amounts of general resources. Here, we show highly accessible sensing systems based on the so-called chemical-nose strategy to transduce the characteristics of microbiota into fluorescence patterns. The fluorescence patterns, generated by twelve block copolymers with aggregation-induced emission (AIE) units, were analyzed using pattern-recognition algorithms, which identified 16 intestinal bacterial strains in a way that correlates with their genome-based taxonomic classification. Importantly, the chemical noses classified artificial models of obesity-associated gut microbiota, and further succeeded in detecting sleep disorder in mice through comparative analysis of normal and abnormal mouse gut microbiota. Our techniques thus allow analyzing complex bacterial samples far more quickly, simply, and inexpensively than common metagenome-based methods, which offers a powerful and complementary tool for the practical analysis of the gut microbiome.

Identifiers

PMID35685788
PMCPMC9132137
OpenAlexW4226140596

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.