ArticlePlants (Basel, Switzerland)2022
Transcriptome Mining Provides Insights into Cell Wall Metabolism and Fiber Lignification in
Luis F Maceda-López, Elsa B Góngora-Castillo, Enrique Ibarra-Laclette, Dalia C Morán-Velázquez, Amaranta Girón Ramírez, Matthieu Bourdon, José L Villalpando-Aguilar, Gabriela Toomer, John Z Tang, Parastoo Azadi and 5 more
Open access · goldAbstract read
In one paragraphArticle in Plants (Basel, Switzerland), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.
0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
2 · The registryThe trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
3 · Its place in the literatureWho cites it
0 citing papers in PubMed, 6 citations in OpenAlex.
No citing paper in PubMed yet.
4 · The recordCorrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
5 · Who and what moneyAuthors and funding
15 authors at 8 institutions in 3 countries.
Luis F Maceda-LópezColegio de Postgraduados, Campus Campeche, Carretera Haltunchén-Edzná km 17.5, Sihochac, Campeche 24450, Mexico.ORCID 0000-0001-8304-4348 Elsa B Góngora-CastilloCONACYT-Centro de Investigación Científica de Yucatán, Unidad de Biotecnología, Calle 43 No. 130 × 32 y 34, Chuburná de Hidalgo, Mérida 97205, Mexico.ORCID 0000-0001-6327-6993 Enrique Ibarra-LacletteRed de Estudios Moleculares Avanzados, Instituto de Ecología A. C. Carretera Antigua a Coatepec 351, El Haya, Xalapa 91070, Mexico.ORCID 0000-0003-1441-1938 Dalia C Morán-VelázquezColegio de Postgraduados, Campus Campeche, Carretera Haltunchén-Edzná km 17.5, Sihochac, Campeche 24450, Mexico.
Amaranta Girón RamírezCentro de Investigación Científica de Yucatán, Unidad de Biotecnología, Calle 43 No. 130 × 32 y 34, Chuburná de Hidalgo, Mérida 97205, Mexico.
Matthieu BourdonSainsbury Laboratory, University of Cambridge, Cambridge CB2 1LR, UK.
José L Villalpando-AguilarColegio de Postgraduados, Campus Campeche, Carretera Haltunchén-Edzná km 17.5, Sihochac, Campeche 24450, Mexico.
Gabriela ToomerDivision of Microbiology and Molecular Biology, IIT Research Institute, Chicago, IL 60616, USA.ORCID 0000-0003-4066-1578 Parastoo AzadiComplex Carbohydrate Research Center, University of Georgia, Athens, GA 30602, USA.
Jorge M SantamaríaCentro de Investigación Científica de Yucatán, Unidad de Biotecnología, Calle 43 No. 130 × 32 y 34, Chuburná de Hidalgo, Mérida 97205, Mexico.
Itzel López-RosasCONACYT-Colegio de Postgraduados Campus Campeche, Carretera Haltunchén-Edzná km 17.5, Sihochac, Campeche 24450, Mexico.
Mercedes G LópezDepartmento de Biotecnología y Bioquímica, Centro de Investigación y Estudios Avanzados del IPN, Irapuato 36824, Mexico.ORCID 0000-0002-0660-8119 June SimpsonDepartmento de Ingeniería Genetica, Centro de Investigación y Estudios Avanzados del IPN, Irapuato 36824, Mexico.
Fulgencio Alatorre-CobosCONACYT-Colegio de Postgraduados Campus Campeche, Carretera Haltunchén-Edzná km 17.5, Sihochac, Campeche 24450, Mexico.ORCID 0000-0001-8114-6180 Autonomous University of Campeche · MXSecretaría de Investigación, Innovación y Educación Superior · MXColegio de Postgraduados · MXInstituto Politécnico Nacional · MXUniversity of Georgia · USIIT Research Institute · USInstituto de Ecología · MXUniversity of Cambridge · GB
Funding
Colegio de Postgraduados AAA-F.A.C.Consejo Nacional de Ciencia y Tecnología 1049-Frontiers in Science
6 · The paper itselfAbstract
Resilience of growing in arid and semiarid regions and a high capacity of accumulating sugar-rich biomass with low lignin percentages have placed Agave species as an emerging bioenergy crop. Although transcriptome sequencing of fiber-producing agave species has been explored, molecular bases that control wall cell biogenesis and metabolism in agave species are still poorly understood. Here, through RNAseq data mining, we reconstructed the cellulose biosynthesis pathway and the phenylpropanoid route producing lignin monomers in
Indexed as
agaveCAD proteincell wallsCESA proteinlignocellulosesclerenchyma
Identifiers
PMID35684270
PMCPMC9182668
OpenAlexW4281977504
What OpenQuestion holds
Textmetadata
LicenceCC BY
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