Evidence map›Paper›PMID 35682857›Full record

ArticleInternational journal of molecular sciences2022

The Pyroptosis-Related Gene Prognostic Index Associated with Tumor Immune Infiltration for Pancreatic Cancer.

Wen Xie, Xiaoyi Li, Chunxiu Yang, Jiahao Li, Guoyan Shen, Hongshan Chen, Shu-Yuan Xiao, Yueying Li

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Wen XieDepartment of Pathology, Wuhan University Zhongnan Hospital, Wuhan 430000, China.ORCID 0000-0003-2455-4748
Xiaoyi LiDepartment of Pathology, Wuhan University Zhongnan Hospital, Wuhan 430000, China.ORCID 0000-0002-3725-259X
Chunxiu YangDepartment of Pathology, Wuhan University Zhongnan Hospital, Wuhan 430000, China.
Jiahao LiDepartment of Pathology, Wuhan University Zhongnan Hospital, Wuhan 430000, China.ORCID 0000-0001-6437-1562
Guoyan ShenDepartment of Pathology, Wuhan University Zhongnan Hospital, Wuhan 430000, China.
Hongshan ChenDepartment of Pathology, Wuhan University Zhongnan Hospital, Wuhan 430000, China.
Shu-Yuan XiaoDepartment of Pathology, University of Chicago Medicine, Chicago, IL 60637, USA.
Yueying LiDepartment of Pathology, Wuhan University Zhongnan Hospital, Wuhan 430000, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pancreatic cancer (PC) is one of the most fatal malignancies. Pyroptosis, a type of inflammatory cell death, likely plays a critical role in the development and progression of tumors. However, the relationship between pyroptosis-related genes (PRGs) and prognosis and immunity to PC is not entirely clear. This study, aimed at identifying the key PRGs in PC, highlights their prognostic value, immune characteristics, and candidate drugs for therapies. We screened 47 differentially expressed PRGs between PC and normal pancreas tissues from The Cancer Genome Atlas (TCGA) and Genotype-Tissue Expression (GTEx) datasets. Afterwards, a pyroptosis-related gene prognostic index (PRGPI) was constructed based on eight PRGs (AIM2, GBP1, HMGB1, IL18, IRF6, NEK7, NLRP1 and PLCG1) selected by univariate and multivariate Cox regression analysis and LASSO regression analysis, and verified in two external datasets from the International Cancer Genome Consortium (ICGC) and Gene Expression Omnibus (GEO) databases. We found that the PC patients in the PRGPI-defined subgroups not only reflected significantly different levels of infiltration in a variety of immune cells, such as M1 macrophages, but also showed differential expression in genes of the human leukocyte antigen (HLA) family and immune checkpoints. Additionally, molecular characteristics and drug sensitivity also stayed close to the PRGPI risk scores. Therefore, PRGPI may serve as a valuable prognostic biomarker and may potentially provide guidance toward novel therapeutic options for PC patients.

Indexed as

Pancreatic NeoplasmsPyroptosisHumansInterferon Regulatory FactorsPrognosisRisk FactorsInterferon Regulatory FactorsIRF6 protein, humanimmune infiltrationpancreatic cancerprognostic indexpyroptosis-related genetherapy

Identifiers

PMID35682857
PMCPMC9180955

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.