Evidence map›Paper›PMID 35681498›Full record

ArticleCells2022

Renal Ischemia Induces Epigenetic Changes in Apoptotic, Proteolytic, and Mitochondrial Genes in Swine Scattered Tubular-like Cells.

Kamalnath S Rajagopalan, Logan M Glasstetter, Xiang-Yang Zhu, Roman Thaler, Hui Tang, Kyra L Jordan, Ishran M Saadiq, Sandra M Herrmann, Alejandro R Chade, Maria V Irazabal and 2 more

Open access · goldAbstract read
In one paragraph

Article in Cells, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
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  4. Role of mitochondria in endogenous renal repair.Clinical science (London, England : 1979) · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Kamalnath S RajagopalanDivision of Nephrology and Hypertension, Mayo Clinic, Rochester, MN 55901, USA.
Logan M GlasstetterDivision of Nephrology and Hypertension, Mayo Clinic, Rochester, MN 55901, USA.
Xiang-Yang ZhuDivision of Nephrology and Hypertension, Mayo Clinic, Rochester, MN 55901, USA.
Roman ThalerDepartment of Orthopedic Surgery, Mayo Clinic, Rochester, MN 55901, USA.
Hui TangDivision of Nephrology and Hypertension, Mayo Clinic, Rochester, MN 55901, USA.
Kyra L JordanDivision of Nephrology and Hypertension, Mayo Clinic, Rochester, MN 55901, USA.
Ishran M SaadiqDivision of Nephrology and Hypertension, Mayo Clinic, Rochester, MN 55901, USA.
Sandra M HerrmannDivision of Nephrology and Hypertension, Mayo Clinic, Rochester, MN 55901, USA.
Alejandro R ChadeDepartment of Physiology and Biophysics, Medicine and Radiology, University of Mississippi Medical Center, Jackson, MS 55901, USA.
Maria V IrazabalDivision of Nephrology and Hypertension, Mayo Clinic, Rochester, MN 55901, USA.ORCID 0000-0002-9904-7778
Lilach O LermanDivision of Nephrology and Hypertension, Mayo Clinic, Rochester, MN 55901, USA.ORCID 0000-0002-3271-3887
Alfonso EirinDivision of Nephrology and Hypertension, Mayo Clinic, Rochester, MN 55901, USA.ORCID 0000-0002-3864-9644
Mayo Clinic · USUniversity of Mississippi Medical Center · US

Funding

Microcirculation in Renovascular HypertensionR01HL095638 · NHLBI · UNIVERSITY OF MISSOURI-COLUMBIA · PI CHADE, ALEJANDRO ROBERTO · 2010 to 2021
$3.9M
Role of homocysteine metabolism, endothelial function and microvascular rarefaction on renal disease severity and progression in ADPKDR01DK128017 · NIDDK · MAYO CLINIC ROCHESTER · PI IRAZABAL, MARIA V · 2021 to 2024
$2.4M
Quantitative magnetization transfer MRI for evaluation of renal fibrosisR01DK122734 · NIDDK · MAYO CLINIC ROCHESTER · PI LERMAN, LILACH O · 2020 to 2023
$2.2M
Role of mitochondrial microRNAs (mitomiRs) in endogenous renal repairR01DK129240 · NIDDK · MAYO CLINIC ROCHESTER · PI Alfonso Eirin · 2023 to 2026
$1.8M
Hypoxic preconditioning for the improvement of the regenerative capacity of adipose-derived mesenchymal stem cells and its application in chronic kidney disease due to hypertensive nephropathyK08DK118120 · NIDDK · MAYO CLINIC ROCHESTER · PI HERRMANN, SANDRA M · 2018 to 2022
$800k
Role of Fumarate and Nrf2 response in the pathogenesis of Autosomal Dominant Polycystic Kidney DiseaseR21DK118391 · NIDDK · MAYO CLINIC ROCHESTER · PI IRAZABAL, MARIA V · 2018 to 2020
$586k
Role of mitochondrial microRNAs (mitomiRs) in endogenous renal repairR56DK129240 · NIDDK · MAYO CLINIC ROCHESTER · PI EIRIN, ALFONSO · 2021 to 2021
$100k
NHLBI NIH HHS R01 HL095638NIDDK NIH HHS K08 DK118120NIDDK NIH HHS R01 DK122734NIDDK NIH HHS R01 DK128017NIDDK NIH HHS R01 DK129240NIDDK NIH HHS R21 DK118391NIDDK NIH HHS R56 DK129240
6 · The paper itself

Abstract

backgroundScattered tubular-like cells (STCs) are dedifferentiated renal tubular cells endowed with progenitor-like characteristics to repair injured parenchymal cells. STCs may be damaged and rendered ineffective by renal artery stenosis (RAS), but the underlying processes remain unclear. We hypothesized that RAS alters the epigenetic landscape on DNA and the ensuing gene transcriptional profile of swine STCs.

methodsCD24+/CD133+ STCs were isolated from pig kidneys after 10 weeks of RAS or sham (

resultsDifferential expression (DE) analysis revealed 239 genes with higher and 236 with lower 5mC levels and 275 genes with higher and 315 with lower 5hmC levels in RAS-STCs compared to Normal-STCs (fold change ≥1.4 or ≤0.7,

conclusionsRenal ischemia induces epigenetic changes in apoptosis-, proteolysis-, and mitochondria-related genes, which correlate with alterations in the transcriptomic profile and corresponding function of swine STCs. These observations may contribute to developing novel targeted interventions to preserve the reparative potency of STCs in renal disease.

Indexed as

Genes, MitochondrialIschemiaAnimalsEpigenesis, GeneticProteolysisRNA, MessengerSwineRNA, Messengerepigeneticsmitochondriarenal artery stenosisrenal ischemiascattered tubular-like cells

Identifiers

PMID35681498
PMCPMC9180447
OpenAlexW4281617391

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.