Evidence map›Paper›PMID 35681062›Full record

ArticleNature methods2022

A general approach for engineering RTKs optically controlled with far-red light.

Anna V Leopold, Stephen Thankachan, Chun Yang, Dmitry Gerashchenko, Vladislav V Verkhusha

Abstract read
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Article in Nature methods, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Photosensitivity of an aging brain.bioRxiv : the preprint server for biology · 2025
    Article
  7. Article
  8. Article
  9. Optogenetic engineering for ion channel modulation.Current opinion in chemical biology · 2025
    Review
  10. Review
  11. Engineering signalling pathways in mammalian cells.Nature biomedical engineering · 2024
    Review
  12. Article
  13. Optogenetic clustering and membrane translocation of the BcLOV4 photoreceptor.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Anna V LeopoldMedicum, Faculty of Medicine, University of Helsinki, Helsinki, Finland.
Stephen ThankachanDepartment of Psychiatry, Harvard Medical School, West Roxbury, MA, USA.
Chun YangDepartment of Psychiatry, Harvard Medical School, West Roxbury, MA, USA.
Dmitry GerashchenkoDepartment of Psychiatry, Harvard Medical School, West Roxbury, MA, USA.
Vladislav V VerkhushaMedicum, Faculty of Medicine, University of Helsinki, Helsinki, Finland. vladislav.verkhusha@einsteinmed.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Regulation of receptor tyrosine kinase (RTK) activity is necessary for studying cell signaling pathways in health and disease. We developed a generalized approach for engineering RTKs optically controlled with far-red light. We targeted the bacterial phytochrome DrBphP to the cell surface and allowed its light-induced conformational changes to be transmitted across the plasma membrane via transmembrane helices to intracellular RTK domains. Systematic optimization of these constructs has resulted in optically regulated epidermal growth factor receptor, HER2, TrkA, TrkB, FGFR1, IR1, cKIT and cMet, named eDrRTKs. eDrRTKs induced downstream signaling in mammalian cells in tens of seconds. The ability to activate eDrRTKs with far-red light enabled spectral multiplexing with fluorescent probes operating in a shorter spectral range, allowing for all-optical assays. We validated eDrTrkB performance in mice and found that minimally invasive stimulation in the neocortex with penetrating via skull far-red light-induced neural activity, early immediate gene expression and affected sleep patterns.

Indexed as

PhytochromeAnimalsCell MembraneLightMammalsMiceSignal TransductionPhytochrome

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.