Evidence map›Paper›PMID 35679131›Full record

ArticleGenome biology and evolution2022

Genetic drift and host-adaptive features likely underlie cladogenesis of insect-associated Lachnospiraceae.

Arturo Vera-Ponce de Leon, Mathias G Schneider, Benjamin C Jahnes, Victoria Sadowski, Lennel A Camuy-Vélez, Jun Duan, Zakee L Sabree

Open access · goldAbstract read
In one paragraph

Article in Genome biology and evolution, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Feeding on aPathogens (Basel, Switzerland) · 2023
    Article
  4. Frontiers in bioengineering and biotechnology · 2023
    Review
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Arturo Vera-Ponce de LeonDepartment of Evolution, Ecology and Organismal Biology, The Ohio State University, Columbus, Ohio, USA.
Mathias G SchneiderDepartment of Evolution, Ecology and Organismal Biology, The Ohio State University, Columbus, Ohio, USA.
Benjamin C JahnesDepartment of Microbiology, The Ohio State University, Columbus, Ohio, USA.
Victoria SadowskiDepartment of Evolution, Ecology and Organismal Biology, The Ohio State University, Columbus, Ohio, USA.ORCID 0000-0002-9621-2387
Lennel A Camuy-VélezDepartment of Microbiology, The Ohio State University, Columbus, Ohio, USA.
Jun DuanPathology and Laboratory Medicine, University of British Columbia, Vancouver, BC, Canada.
Zakee L SabreeDepartment of Evolution, Ecology and Organismal Biology, The Ohio State University, Columbus, Ohio, USA.ORCID 0000-0001-9310-1641
The Ohio State University · USUniversity of British Columbia · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phylogenetic and functional group analysis of the genomes of anaerobic bacteria isolated from Periplaneta americana digestive tracts suggest that they represent novel Lachnospiraceae genera. PAL113 and PAL227 isolate genomes encoded short-chain fatty acid biosynthetic pathways and plant fiber and chitin catabolism and other carbohydrate utilization genes common in related Lachnospiraceae species, yet the presence of operons containing flagellar assembly pathways were among several distinguishing features. In general, PAL113 and PAL227 isolates encode an array of gene products that would enable them to thrive in the insect gut environment and potentially play a role in host diet processing. We hypothesize that cladogenesis of these isolates could be due to their oxygen sensitivity, reliance upon the host for dispersal and genetic drift and not necessarily as a result of an ongoing mutualism.

Indexed as

cladogenesiscockroachgut bacteriaLachnospiraceae

Identifiers

PMID35679131
PMCPMC9210297
OpenAlexW4281668353

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.