Evidence map›Paper›PMID 35676539›Full record

ArticleNature chemical biology2022

Structure and activity of human TMPRSS2 protease implicated in SARS-CoV-2 activation.

Bryan J Fraser, Serap Beldar, Almagul Seitova, Ashley Hutchinson, Dhiraj Mannar, Yanjun Li, Daniel Kwon, Ruiyan Tan, Ryan P Wilson, Karoline Leopold and 4 more

Open access · bronzeAbstract read
PubMed Publisher
In one paragraph

Article in Nature chemical biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 129 papers.

0numbers the graph read from it
0cells of the map it votes in
129citing papers in PubMed
19.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

129 citing papers in PubMed, 201 citations in OpenAlex.

  1. Article
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  4. Review
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  6. Review
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  8. Article
  9. Article
  10. Article
  11. TMPRSS2-mediated coronavirus spike activation and inhibition.Nature structural & molecular biology · 2026
    Article
  12. Article
  13. Article
  14. Review
  15. Differential Evolution for Docking Simulations.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. In Silico Analysis of CMolecules (Basel, Switzerland) · 2025
    Article

69 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Bryan J Fraser *Department of Molecular Oncology, British Columbia Cancer Research Institute, Vancouver, British Columbia, Canada.
Serap Beldar *Structural Genomics Consortium, University of Toronto, Toronto, Ontario, Canada.ORCID http://orcid.org/0000-0002-7601-4543
Almagul SeitovaStructural Genomics Consortium, University of Toronto, Toronto, Ontario, Canada.
Ashley HutchinsonStructural Genomics Consortium, University of Toronto, Toronto, Ontario, Canada.
Dhiraj MannarDepartment of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, British Columbia, Canada.
Yanjun LiStructural Genomics Consortium, University of Toronto, Toronto, Ontario, Canada.ORCID http://orcid.org/0000-0002-9512-5265
Daniel KwonDepartment of Molecular Oncology, British Columbia Cancer Research Institute, Vancouver, British Columbia, Canada.
Ruiyan TanDepartment of Molecular Oncology, British Columbia Cancer Research Institute, Vancouver, British Columbia, Canada.
Ryan P WilsonDepartment of Molecular Oncology, British Columbia Cancer Research Institute, Vancouver, British Columbia, Canada.
Karoline LeopoldDepartment of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, British Columbia, Canada.ORCID http://orcid.org/0000-0001-5904-5076
Sriram SubramaniamDepartment of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, British Columbia, Canada.
Levon HalabelianStructural Genomics Consortium, University of Toronto, Toronto, Ontario, Canada. L.halabelian@utoronto.ca.ORCID http://orcid.org/0000-0003-4361-3619
Cheryl H ArrowsmithStructural Genomics Consortium, University of Toronto, Toronto, Ontario, Canada. Cheryl.arrowsmith@uhnresearch.ca.ORCID http://orcid.org/0000-0002-4971-3250
François BénardDepartment of Molecular Oncology, British Columbia Cancer Research Institute, Vancouver, British Columbia, Canada. fbenard@bccrc.ca.ORCID http://orcid.org/0000-0001-7995-3581
University of Toronto · CAUniversity of British Columbia · CABC Cancer Agency · CA

Funding

User Training and OutreachP30GM124165 · NIGMS · CORNELL UNIVERSITY · PI STEVEN E EALICK · 2018 to 2026
$34.2M
Pixel Array Detector for Macromolecular CrystallographyS10OD021527 · OD · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2016 to 2016
$2.0M
CIHR FDN154328NIGMS NIH HHS P30 GM124165NIH HHS S10 OD021527
6 · The paper itself

Abstract

Transmembrane protease, serine 2 (TMPRSS2) has been identified as key host cell factor for viral entry and pathogenesis of SARS-CoV-2. Specifically, TMPRSS2 proteolytically processes the SARS-CoV-2 Spike (S) protein, enabling virus-host membrane fusion and infection of the airways. We present here a recombinant production strategy for enzymatically active TMPRSS2 and characterization of its matured proteolytic activity, as well as its 1.95 Å X-ray cocrystal structure with the synthetic protease inhibitor nafamostat. Our study provides a structural basis for the potent but nonspecific inhibition by nafamostat and identifies distinguishing features of the TMPRSS2 substrate binding pocket that explain specificity. TMPRSS2 cleaved SARS-CoV-2 S protein at multiple sites, including the canonical S1/S2 cleavage site. We ranked the potency of clinical protease inhibitors with half-maximal inhibitory concentrations ranging from 1.4 nM to 120 µM and determined inhibitor mechanisms of action, providing the groundwork for drug development efforts to selectively inhibit TMPRSS2.

Indexed as

COVID-19SARS-CoV-2HumansPeptide HydrolasesSerine EndopeptidasesSpike Glycoprotein, CoronavirusVirus InternalizationPeptide HydrolasesSerine EndopeptidasesSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2TMPRSS2 protein, human

Identifiers

PMID35676539
OpenAlexW4281763324

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.