Evidence map›Paper›PMID 35676473›Full record

ArticleNature2022

Synonymous mutations in representative yeast genes are mostly strongly non-neutral.

Xukang Shen, Siliang Song, Chuan Li, Jianzhi Zhang

Open access · greenAbstract read
In one paragraph

Article in Nature, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 162 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
162citing papers in PubMed, 2 pooled it
30.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

162 citing papers in PubMed, 2 syntheses or guidelines pooled it, 313 citations in OpenAlex.

  1. Pooled it
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  3. Review
  4. Pharmacological readthrough and base editing forMolecular therapy. Nucleic acids · 2026
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102 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Xukang ShenDepartment of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI, USA.ORCID http://orcid.org/0000-0002-9446-4644
Siliang SongDepartment of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI, USA.ORCID http://orcid.org/0000-0002-4658-5062
Chuan LiDepartment of Biology, Stanford University, Stanford, CA, USA.
Jianzhi ZhangDepartment of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI, USA. jianzhi@umich.edu.ORCID http://orcid.org/0000-0001-6141-1290
University of Michigan · USMicrosoft (United States) · US

Funding

Genomic and Systemic Approaches to Evolutionary MechanismsR35GM139484 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI JIANZHI ZHANG · 2021 to 2026
$3.2M
NIGMS NIH HHS R35 GM139484
6 · The paper itself

Abstract

Synonymous mutations in protein-coding genes do not alter protein sequences and are thus generally presumed to be neutral or nearly neutral

Indexed as

Genes, FungalGenetic FitnessSaccharomyces cerevisiaeSilent MutationAmino Acid SequenceCodon, NonsenseEvolution, MolecularMutation RateRNA, FungalRNA, MessengerSaccharomyces cerevisiae ProteinsSelection, GeneticCodon, NonsenseRNA, FungalRNA, MessengerSaccharomyces cerevisiae Proteins

Identifiers

PMID35676473
PMCPMC9650438
OpenAlexW4281755657

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.