Evidence map›Paper›PMID 35674881›Full record

ArticleGenes & genomics2022

Characterization of the complete mitogenome of the endangered freshwater fish Gobiobotia naktongensis from the Geum River in South Korea: evidence of stream connection with the Paleo-Huanghe.

Keun-Sik Kim, Dong-Won Kang, Keun-Yong Kim, Jung Soo Heo, Ha-Yoon Song, Ju-Duk Yoon

Open access · hybridAbstract read
In one paragraph

Article in Genes & genomics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Keun-Sik KimRestoration Research Team (Fishes/Amphibians & Reptiles), Research Center for Endangered Species, National Institute of Ecology, 23 Gowol-gil, Yeongyang-gun, Gyeongsangbuk-do, 36531, Republic of Korea.
Dong-Won KangRestoration Research Team (Fishes/Amphibians & Reptiles), Research Center for Endangered Species, National Institute of Ecology, 23 Gowol-gil, Yeongyang-gun, Gyeongsangbuk-do, 36531, Republic of Korea.
Keun-Yong KimDepartment of Genetic Analysis, AquaGenTech Co., Ltd, 48300, Busan, Republic of Korea.
Jung Soo HeoDepartment of Genetic Analysis, AquaGenTech Co., Ltd, 48300, Busan, Republic of Korea.
Ha-Yoon SongInland Fisheries Research Institute, National Institute of Fisheries Science, 32762, Geumsan, Republic of Korea.
Ju-Duk YoonRestoration Research Team (Fishes/Amphibians & Reptiles), Research Center for Endangered Species, National Institute of Ecology, 23 Gowol-gil, Yeongyang-gun, Gyeongsangbuk-do, 36531, Republic of Korea. grandblue@nie.re.kr.ORCID 0000-0003-1667-327X
National Institute of Ecology · KRNational Institute of Fisheries Science · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe freshwater fish Gobiobotia naktongensis (Teleostei, Cypriniformes, and Gobionidae) is an endangered class I species whose population size has been greatly reduced.

objectiveTo successfully protect and restore the highly endangered freshwater fish G. naktongensis from the Geum River in South Korea.

methodsThe mitogenome was characterized using the primer walking method with phylogenetic relationships.

resultsThe complete mitogenome of G. naktongensis Geum River was 16,607 bp, comprising 13 protein-coding genes, 2 ribosomal RNA genes, and 22 transfer RNA (tRNA) genes. Seventeen substitutions were found by comparing the tRNA regions between G. naktongensis Geum and Nakdong Rivers and G. pappenheimi; most were specific to G. naktongensis Nakdong River, with changes in their secondary structures. The comparison between G. naktongensis Geum River and G. pappenheimi revealed differences in the lengths of the D-loop and two tRNAs (tRNA

conclusionsOur results support the existence of the Paleo-Huanghe River connecting the Korean peninsula and mainland China, suggesting that G. naktongensis in the Geum River should be treated as a different evolutionarily significant unit separated from that in the Nakdong River. The complete mitogenome of G. naktongensis Geum River provides essential baseline data to establish strategies for its conservation and restoration.

Indexed as

CypriniformesGenome, MitochondrialGeumAnimalsEndangered SpeciesFresh WaterPhylogenyRiversRNA, TransferRNA, TransferEndangered speciesGeum RiverGobiobotia naktongensisGobiobotia pappenheimiMitogenomePaleo-HuanghePhylogeny

Identifiers

PMID35674881
PMCPMC9273560
OpenAlexW4281912991

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.