Evidence map›Paper›PMID 35674860›Full record

ArticleThe protein journal2022

SAXS Analysis and Characterization of Anticancer Activity of PNP-UDP Family Protein from Putranjiva roxburghii.

Preeti Verma, Ritu Varshney, Shiv Pratap Singh Yadav, Bibekananda Kar, Partha Roy, Ashwani K Sharma

Abstract read
PubMed Publisher
In one paragraph

Article in The protein journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Preeti VermaDepartment of Biosciences and Bioengineering, Indian Institute of Technology Roorkee, Roorkee, 247 667, India.
Ritu VarshneyDepartment of Biosciences and Bioengineering, Indian Institute of Technology Roorkee, Roorkee, 247 667, India.
Shiv Pratap Singh YadavCSIR-Institute of Microbial Technology, Chandigarh, 160 036, India.
Bibekananda KarDepartment of Biosciences and Bioengineering, Indian Institute of Technology Roorkee, Roorkee, 247 667, India.
Partha RoyDepartment of Biosciences and Bioengineering, Indian Institute of Technology Roorkee, Roorkee, 247 667, India.
Ashwani K SharmaDepartment of Biosciences and Bioengineering, Indian Institute of Technology Roorkee, Roorkee, 247 667, India. ashwani.sharma@bt.iitr.ac.in.ORCID 0000-0002-1180-056X
Indian Institute of Technology Roorkee · INInstitute of Microbial Technology · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A class of plant defense and storage proteins, including Putranjiva roxburghii PNP protein (PRpnp), belongs to PNP-UDP family. The PRpnp and related plant proteins contain a disrupted PNP-UDP domain as revealed in previous studies. In PRpnp, the insert disrupting the domain contains the trypsin inhibitory site. In the present work, we analyzed native PRpnp (nPRpnp) complex formation with trypsin and inosine using SAXS experiments and established its dual functionality. Results indicated a relatively compact nPRpnp:Inosine structure, whereas trypsin complex showed conformational changes/flexibility. nPRpnp also exhibited a strong anti-cancer activity toward breast cancer (MCF-7), prostate cancer (DU-145) and hepatocellular carcinoma (HepG2) cell lines. MCF-7 and DU-145 were more sensitive to nPRpnp treatment as compared to HepG2. However, nPRpnp treatment showed no effect on the viability of HEK293 cells indicating that nPRpnp is specific for targeting the viability of only cancer cells. Further, acridine orange, DAPI and DNA fragmentation studies showed that cytotoxic effect of nPRpnp is mediated through induction of apoptosis as evident from the apoptosis-associated morphological changes and nuclear fragmentation observed after PRpnp treatment of cancer cells. These results suggest that PRpnp has the potential to be used as an anticancer agent. This is first report of anticancer activity as well as SAXS-based analysis for a PNP enzyme with trypsin inhibitory activity.

Indexed as

Antineoplastic AgentsMagnoliopsidaNeoplasmsApoptosisHEK293 CellsHep G2 CellsHumansInosineMaleMCF-7 CellsPlant ProteinsScattering, Small AngleTrypsinUridine DiphosphateX-Ray DiffractionAntineoplastic AgentsInosinePlant ProteinsTrypsinUridine DiphosphateAnticancer activityPNP-UDPPutranjiva roxburghiiSAXS analysisTrypsin inhibitory activity

Identifiers

PMID35674860
OpenAlexW4281775730

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.