Evidence map›Paper›PMID 35673821›Full record

ArticleRomanian journal of morphology and embryology = Revue roumaine de morphologie et embryologie

Deep learning with transfer learning in pathology. Case study: classification of basal cell carcinoma.

Raluca Maria Bungărdean, Mircea Sebastian Şerbănescu, Costin Teodor Streba, Maria Crişan

Abstract read
In one paragraph

Article in Romanian journal of morphology and embryology = Revue roumaine de morphologie et embryologie. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Review
  2. Article
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  7. Review
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  9. Article
  10. Automated cutaneous squamous cell carcinoma grading using deep learning with transfer learning.Romanian journal of morphology and embryology = Revue roumaine de morphologie et embryologie
    Article
  11. Immunohistochemical expression of p53, Ki67, α-SMA, CD44 and CD31 in different histological subtypes of basal cell carcinoma.Romanian journal of morphology and embryology = Revue roumaine de morphologie et embryologie
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Raluca Maria BungărdeanDepartment of Medical Informatics and Biostatistics, University of Medicine and Pharmacy of Craiova, Romania; mircea_serbanescu@yahoo.com.
Mircea Sebastian Şerbănescu
Costin Teodor Streba
Maria Crişan

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Establishing basal cell carcinoma (BCC) subtype is sometimes challenging for pathologists. Deep-learning (DL) algorithms are an emerging approach in image classification due to their performance, accompanied by a new concept - transfer learning, which implies replacing the final layers of a trained network and retraining it for a new task, while keeping the weights from the imported layers. A DL convolution-based software, capable of classifying 10 subtypes of BCC, was designed. Transfer learning from three general-purpose image classification networks (AlexNet, GoogLeNet, and ResNet-18) was used. Three pathologists independently labeled 2249 patches. Ninety percent of data was used for training and 10% for testing on 100 independent training sequences. Each of the resulted networks independently labeled the whole dataset. Mean and standard deviation (SD) accuracy (ACC) [%]∕sensitivity (SN) [%]∕specificity (SP) [%]∕area under the curve (AUC) for all the networks was 82.53±2.63∕72.52±3.63∕97.94±0.3/0.99. The software was validated on another 50-image dataset, and its results are comparable with the result of three pathologists in terms of agreement. All networks had similar classification accuracies, which demonstrated that they reached a maximum classification rate on the dataset. The software shows promising results, and with further development can be successfully used on histological images, assisting pathologists' diagnosis and teaching.

Indexed as

Basal Cell CarcinomaDeep LearningSkin NeoplasmsAlgorithmsHumansPathologists

Identifiers

PMID35673821
PMCPMC9289702

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.