Evidence map›Paper›PMID 35672870›Full record

ArticleAnimal microbiome2022

Signatures of functional bacteriome structure in a tropical direct-developing amphibian species.

Renato A Martins, Sasha E Greenspan, Daniel Medina, Shannon Buttimer, Vanessa M Marshall, Wesley J Neely, Samantha Siomko, Mariana L Lyra, Célio F B Haddad, Vinícius São-Pedro and 1 more

Abstract read
In one paragraph

Article in Animal microbiome, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Renato A Martins *Programa de Pós-Graduação em Conservação da Fauna, Universidade Federal de São Carlos, São Carlos, SP, 13565-905, Brazil.
Sasha E Greenspan *Department of Biological Sciences, The University of Alabama, Tuscaloosa, AL, 35487, USA. sasha.greenspan@gmail.com.ORCID http://orcid.org/0000-0001-8883-2968
Daniel MedinaSistema Nacional de Investigación, SENACYT, Building 205, City of Knowledge, Clayton, Panama, Republic of Panama.ORCID http://orcid.org/0000-0002-5217-6353
Shannon ButtimerDepartment of Biological Sciences, The University of Alabama, Tuscaloosa, AL, 35487, USA.ORCID http://orcid.org/0000-0002-4128-5482
Vanessa M MarshallDepartment of Biological Sciences, The University of Alabama, Tuscaloosa, AL, 35487, USA.
Wesley J NeelyDepartment of Biological Sciences, The University of Alabama, Tuscaloosa, AL, 35487, USA.
Samantha SiomkoDepartment of Biological Sciences, The University of Alabama, Tuscaloosa, AL, 35487, USA.
Mariana L LyraDepartment of Biodiversity and Aquaculture Center (CAUNESP), Universidade Estadual Paulista, Rio Claro, SP, 13506-900, Brazil.
Célio F B HaddadDepartment of Biodiversity and Aquaculture Center (CAUNESP), Universidade Estadual Paulista, Rio Claro, SP, 13506-900, Brazil.
Vinícius São-PedroCentro de Ciências da Natureza, Universidade Federal de São Carlos, Campus Lagoa do Sino, Buri, SP, 18290-000, Brazil.
C Guilherme BeckerDepartment of Biological Sciences, The University of Alabama, Tuscaloosa, AL, 35487, USA. guibecker@psu.edu.ORCID http://orcid.org/0000-0002-5122-8238

Funding

National Science Foundation IOS-1947681
6 · The paper itself

Abstract

backgroundHost microbiomes may differ under the same environmental conditions and these differences may influence susceptibility to infection. Amphibians are ideal for comparing microbiomes in the context of disease defense because hundreds of species face infection with the skin-invading microbe Batrachochytrium dendrobatidis (Bd), and species richness of host communities, including their skin bacteria (bacteriome), may be exceptionally high. We conducted a landscape-scale Bd survey of six co-occurring amphibian species in Brazil's Atlantic Forest. To test the bacteriome as a driver of differential Bd prevalence, we compared bacteriome composition and co-occurrence network structure among the six focal host species.

resultsIntensive sampling yielded divergent Bd prevalence in two ecologically similar terrestrial-breeding species, a group with historically low Bd resistance. Specifically, we detected the highest Bd prevalence in Ischnocnema henselii but no Bd detections in Haddadus binotatus. Haddadus binotatus carried the highest bacteriome alpha and common core diversity, and a modular network partitioned by negative co-occurrences, characteristics associated with community stability and competitive interactions that could inhibit Bd colonization.

conclusionsOur findings suggest that community structure of the bacteriome might drive Bd resistance in H. binotatus, which could guide microbiome manipulation as a conservation strategy to protect diverse radiations of direct-developing species from Bd-induced population collapses.

Indexed as

Bacterial co-occurrence network analysisBatrachochytrium dendrobatidisBrazil’s Atlantic ForestEcological coreHaddadus binotatusIschnocnema henseliiMicrobiome

Identifiers

PMID35672870
PMCPMC9172097

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.