Evidence map›Paper›PMID 35672799›Full record

ArticleGenome biology2022

Dissection of multiple sclerosis genetics identifies B and CD4+ T cells as driver cell subsets.

Michael H Guo, Prashanth Sama, Brenna A LaBarre, Hrishikesh Lokhande, John Balibalos, Ci Chu, Xiaomi Du, Pouya Kheradpour, Charles C Kim, Taylor Oniskey and 5 more

Open access · goldAbstract read
In one paragraph

Article in Genome biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 2 institutions in 1 country.

Michael H GuoDepartment of Neurology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, 19104, USA. mhguo1@gmail.com.ORCID 0000-0002-1357-6389
Prashanth SamaBroad Institute of Harvard and Massachusetts Institute of Technology, Cambridge, MA, 02142, USA.
Brenna A LaBarreBroad Institute of Harvard and Massachusetts Institute of Technology, Cambridge, MA, 02142, USA.
Hrishikesh LokhandeBrigham Multiple Sclerosis Center, Brigham and Women's Hospital, Boston, MA, 02115, USA.
John BalibalosVerily Life Sciences, South San Francisco, 94080, USA.
Ci ChuVerily Life Sciences, South San Francisco, 94080, USA.
Xiaomi DuVerily Life Sciences, South San Francisco, 94080, USA.
Pouya KheradpourVerily Life Sciences, South San Francisco, 94080, USA.
Charles C KimVerily Life Sciences, South San Francisco, 94080, USA.
Taylor OniskeyVerily Life Sciences, South San Francisco, 94080, USA.
Thomas SnyderVerily Life Sciences, South San Francisco, 94080, USA.
Damien Z SoghoianVerily Life Sciences, South San Francisco, 94080, USA.
Howard L WeinerBrigham Multiple Sclerosis Center, Brigham and Women's Hospital, Boston, MA, 02115, USA.
Tanuja ChitnisBrigham Multiple Sclerosis Center, Brigham and Women's Hospital, Boston, MA, 02115, USA.
Nikolaos A PatsopoulosBroad Institute of Harvard and Massachusetts Institute of Technology, Cambridge, MA, 02142, USA. npatsop@gmail.com.
Broad Institute · USBrigham and Women's Hospital · US

Funding

Research Training Program in Disease Oriented Neuroscience (R25)R25NS065745 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI DETRE, JOHN A · 2009 to 2023
$3.0M
NINDS NIH HHS R25 NS065745
6 · The paper itself

Abstract

backgroundMultiple sclerosis (MS) is an autoimmune condition of the central nervous system with a well-characterized genetic background. Prior analyses of MS genetics have identified broad enrichments across peripheral immune cells, yet the driver immune subsets are unclear.

resultsWe utilize chromatin accessibility data across hematopoietic cells to identify cell type-specific enrichments of MS genetic signals. We find that CD4 T and B cells are independently enriched for MS genetics and further refine the driver subsets to T

conclusionsOverall, our study finds that open chromatin regions in CD4 T cells and B cells independently drive MS genetic signals. Our study highlights how careful integration of genetics and epigenetics can provide fine-scale insights into causal cell types and nominate new genes and pathways for disease.

Indexed as

Multiple SclerosisB-LymphocytesCD4-Positive T-LymphocytesChromatinHumansImmunityChromatin

Identifiers

PMID35672799
PMCPMC9175345
OpenAlexW4281612636

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.