Evidence map›Paper›PMID 35672711›Full record

ArticleBMC cancer2022

Synergistic anti-proliferative activity of JQ1 and GSK2801 in triple-negative breast cancer.

Nanda Kumar Yellapu, Thuc Ly, Mihaela E Sardiu, Dong Pei, Danny R Welch, Jeffery A Thompson, Devin C Koestler

Open access · goldAbstract read
In one paragraph

Article in BMC cancer, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Nanda Kumar YellapuDepartment of Biostatistics & Data Science, University of Kansas, Medical Center, KS, Kansas City, USA.
Thuc LyThe University of Kansas Cancer Center, Kansas City, KS, USA.
Mihaela E SardiuDepartment of Biostatistics & Data Science, University of Kansas, Medical Center, KS, Kansas City, USA.
Dong PeiDepartment of Biostatistics & Data Science, University of Kansas, Medical Center, KS, Kansas City, USA.
Danny R WelchThe University of Kansas Cancer Center, Kansas City, KS, USA.
Jeffery A ThompsonDepartment of Biostatistics & Data Science, University of Kansas, Medical Center, KS, Kansas City, USA. jthompson21@kumc.edu.
Devin C KoestlerDepartment of Biostatistics & Data Science, University of Kansas, Medical Center, KS, Kansas City, USA. dkoestler@kumc.edu.
The University of Kansas Cancer Center · USUniversity of Kansas Medical Center · US

Funding

Mentoring CoreP20GM103418 · NIGMS · UNIVERSITY OF KANSAS MEDICAL CENTER · PI Douglas E Wright · 2012 to 2026
$63.0M
Transgenic & Gene-Targeting Shared ResourceP30CA168524 · NCI · UNIVERSITY OF KANSAS MEDICAL CENTER · PI ROY A. JENSEN · 2012 to 2026
$40.1M
Using Integrated Omics to Identify Dysfunctional Genetic Mechanisms Influencing Schizophrenia and Sleep DisturbancesP20GM130423 · NIGMS · UNIVERSITY OF KANSAS MEDICAL CENTER · PI Diane E Mahoney · 2019 to 2026
$21.5M
NCI NIH HHS P30 CA168524NIGMS NIH HHS P20 GM103418NIGMS NIH HHS P20 GM130423
6 · The paper itself

Abstract

backgroundTriple-negative breast cancer (TNBC) constitutes 10-20% of breast cancers and is challenging to treat due to a lack of effective targeted therapies. Previous studies in TNBC cell lines showed in vitro growth inhibition when JQ1 or GSK2801 were administered alone, and enhanced activity when co-administered. Given their respective mechanisms of actions, we hypothesized the combinatorial effect could be due to the target genes affected. Hence the target genes were characterized for their expression in the TNBC cell lines to prove the combinatorial effect of JQ1 and GSK2801.

methodsRNASeq data sets of TNBC cell lines (MDA-MB-231, HCC-1806 and SUM-159) were analyzed to identify the differentially expressed genes in single and combined treatments. The topmost downregulated genes were characterized for their downregulated expression in the TNBC cell lines treated with JQ1 and GSK2801 under different dose concentrations and combinations. The optimal lethal doses were determined by cytotoxicity assays. The inhibitory activity of the drugs was further characterized by molecular modelling studies.

resultsGlobal expression profiling of TNBC cell lines using RNASeq revealed different expression patterns when JQ1 and GSK2801 were co-administered. Functional enrichment analyses identified several metabolic pathways (i.e., systemic lupus erythematosus, PI3K-Akt, TNF, JAK-STAT, IL-17, MAPK, Rap1 and signaling pathways) enriched with upregulated and downregulated genes when combined JQ1 and GSK2801 treatment was administered. RNASeq identified downregulation of PTPRC, MUC19, RNA5-8S5, KCNB1, RMRP, KISS1 and TAGLN (validated by RT-qPCR) and upregulation of GPR146, SCARA5, HIST2H4A, CDRT4, AQP3, MSH5-SAPCD1, SENP3-EIF4A1, CTAGE4 and RNASEK-C17orf49 when cells received both drugs. In addition to differential gene regulation, molecular modelling predicted binding of JQ1 and GSK2801 with PTPRC, MUC19, KCNB1, TAGLN and KISS1 proteins, adding another mechanism by which JQ1 and GSK2801 could elicit changes in metabolism and proliferation.

conclusionJQ1-GSK2801 synergistically inhibits proliferation and results in selective gene regulation. Besides suggesting that combinatorial use could be useful therapeutics for the treatment of TNBC, the findings provide a glimpse into potential mechanisms of action for this combination therapy approach.

Indexed as

Carcinoma, HepatocellularLiver NeoplasmsTriple Negative Breast NeoplasmsAzepinesCell Line, TumorCell ProliferationCysteine EndopeptidasesGene Expression Regulation, NeoplasticHumansIndolizinesKisspeptinsPhosphatidylinositol 3-KinasesScavenger Receptors, Class ASulfonesTriazoles1-(1-(3-(methylsulfonyl)phenyl)-7-propoxyindolizin-3-yl)ethanoneAzepinesCysteine EndopeptidasesIndolizines(+)-JQ1 compoundKisspeptinsPhosphatidylinositol 3-KinasesSCARA5 protein, humanScavenger Receptors, Class ASENP3 protein, humanSulfonesTriazolesBreast cancerDifferential expression analysisDrug resistanceExpression studiesMTT assayRNASeq

Identifiers

PMID35672711
PMCPMC9173973
OpenAlexW4281688503

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.