Evidence map›Paper›PMID 35672689›Full record

ArticleBMC infectious diseases2022

Evaluation of a direct phage DNA detection-based Taqman qPCR methodology for quantification of phage and its application in rapid ultrasensitive identification of Acinetobacter baumannii.

Jun Luo, Min Liu, Peng Wang, Qianyuan Li, Chunhua Luo, Hongping Wei, Yuanyuan Hu, Junping Yu

Open access · goldAbstract read
In one paragraph

Article in BMC infectious diseases, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

  1. Robust detection in faeces andVeterinary and animal science · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Jun LuoThe First College of Clinical Medical Science, China Three Gorges University, Yichang, China. lj1988cby@126.com.
Min LiuThe First College of Clinical Medical Science, China Three Gorges University, Yichang, China.
Peng WangThe First College of Clinical Medical Science, China Three Gorges University, Yichang, China.
Qianyuan LiThe First College of Clinical Medical Science, China Three Gorges University, Yichang, China.
Chunhua LuoThe First College of Clinical Medical Science, China Three Gorges University, Yichang, China.
Hongping WeiCAS Key Laboratory of Special Pathogens and Biosafety, Center for Emerging Infectious Diseases, Wuhan Institute of Virology, Chinese Academy of Sciences, Wuhan, 430071, Hubei, China.
Yuanyuan HuMedical College, China Three Gorges University, Yichang, 443002, China. huyuanyuan@ctgu.edu.cn.
Junping YuCAS Key Laboratory of Special Pathogens and Biosafety, Center for Emerging Infectious Diseases, Wuhan Institute of Virology, Chinese Academy of Sciences, Wuhan, 430071, Hubei, China. yujp@wh.iov.cn.
China Three Gorges University · CNChinese Academy of Sciences · CNYichang Central People's Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRapid phage enumeration/quantitation and viable bacteria determination is critical for phage application and treatment of infectious patients caused by the pathogenic bacteria.

methodsIn the current study, a direct phage DNA detection-based Taqman qPCR methodology for quantification of phage P53 and rapid ultrasensitive identification of Acinetobacter baumannii (A. baumannii) was evaluated.

resultsThe assay was capable of quantifying P53 phage DNA without DNA extraction and the detection limit of the assay was 550 PFU/mL. The agreement bias between the quantitative results of three different phage concentrations in this assay and double agar overlay plaque assay were under 3.38%. Through the built detection system, down to 1 log CFU/mL of viable A. baumannii can be detected within 4 h in A. baumannii spiked swab and bronchoalveolar lavage fluid samples. Compared with the Taqman qPCR that targets the conserved sequence of A. baumannii, the sensitivity of the assay built in this study could increase four orders of magnitude.

conclusionsThe methodology offers a valid alternative for enumeration of freshly prepared phage solution and diagnosis of bacterial infection caused by A. baumannii or other bacterial infection in complicated samples through switching to phages against other bacteria. Furthermore, the assay could offer drug adjustment strategy timely owing to the detection of bacteria vitality.

Indexed as

Acinetobacter baumanniiAcinetobacter InfectionsBacteriophagesDNAHumansTumor Suppressor Protein p53DNATumor Suppressor Protein p53DetectionDirect phage DNA detection-based Taqman qPCRQuantification of phageSwab/bronchoalveolar lavage fluidViable Acinetobacter baumannii

Identifiers

PMID35672689
PMCPMC9172196
OpenAlexW4281732128

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.