Evidence map›Paper›PMID 35672293›Full record

ArticleNature communications2022

pH- and concentration-dependent supramolecular assembly of a fungal defensin plectasin variant into helical non-amyloid fibrils.

Christin Pohl, Gregory Effantin, Eaazhisai Kandiah, Sebastian Meier, Guanghong Zeng, Werner Streicher, Dorotea Raventos Segura, Per H Mygind, Dorthe Sandvang, Line Anker Nielsen and 5 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.2field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Amyloid-Based Albumin Hydrogels.Advanced healthcare materials · 2023
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 4 countries.

Christin PohlNovozymes A/S, Bagsvaerd, Denmark. christin.pohl@biochemistry.lu.se.ORCID http://orcid.org/0000-0001-6193-4016
Gregory EffantinUniv. Grenoble Alpes, CNRS, CEA, Institute for Structural Biology, F-38000, Grenoble, France.ORCID http://orcid.org/0000-0002-6957-0875
Eaazhisai KandiahEuropean Synchrotron Radiation Facility, Grenoble, France.ORCID http://orcid.org/0000-0002-9877-7621
Sebastian MeierTechnical University of Denmark, Department of Chemistry, Kgs. Lyngby, Denmark.ORCID http://orcid.org/0000-0003-3761-3217
Guanghong ZengDFM A/S (Danish National Metrology Institute), Hoersholm, Denmark.
Werner StreicherNovozymes A/S, Bagsvaerd, Denmark.
Dorotea Raventos SeguraNovozymes A/S, Bagsvaerd, Denmark.
Per H MygindNovozymes A/S, Bagsvaerd, Denmark.
Dorthe SandvangNovozymes A/S, Bagsvaerd, Denmark.
Line Anker NielsenNovozymes A/S, Bagsvaerd, Denmark.
Günther H J PetersTechnical University of Denmark, Department of Chemistry, Kgs. Lyngby, Denmark.ORCID http://orcid.org/0000-0001-9754-2663
Guy SchoehnUniv. Grenoble Alpes, CNRS, CEA, Institute for Structural Biology, F-38000, Grenoble, France.ORCID http://orcid.org/0000-0002-1459-3201
Christoph Mueller-DieckmannEuropean Synchrotron Radiation Facility, Grenoble, France.
Allan NoergaardNovozymes A/S, Bagsvaerd, Denmark.ORCID http://orcid.org/0000-0003-1850-9879
Pernille HarrisTechnical University of Denmark, Department of Chemistry, Kgs. Lyngby, Denmark. phharris@chem.ku.dk.ORCID http://orcid.org/0000-0002-6806-4903
Novozymes (Denmark) · DKCentre National de la Recherche Scientifique · FREuropean Synchrotron Radiation Facility · FRTechnical University of Denmark · DKNovo Nordisk (Denmark) · DKUniversity of Copenhagen · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Self-assembly and fibril formation play important roles in protein behaviour. Amyloid fibril formation is well-studied due to its role in neurodegenerative diseases and characterized by refolding of the protein into predominantly β-sheet form. However, much less is known about the assembly of proteins into other types of supramolecular structures. Using cryo-electron microscopy at a resolution of 1.97 Å, we show that a triple-mutant of the anti-microbial peptide plectasin, PPI42, assembles into helical non-amyloid fibrils. The in vitro anti-microbial activity was determined and shown to be enhanced compared to the wildtype. Plectasin contains a cysteine-stabilised α-helix-β-sheet structure, which remains intact upon fibril formation. Two protofilaments form a right-handed protein fibril. The fibril formation is reversible and follows sigmoidal kinetics with a pH- and concentration dependent equilibrium between soluble monomer and protein fibril. This high-resolution structure reveals that α/β proteins can natively assemble into fibrils.

Indexed as

AmyloidPeptidesCryoelectron MicroscopyDefensinsHydrogen-Ion ConcentrationAmyloidDefensinsPeptidesplectasin

Identifiers

PMID35672293
PMCPMC9174238
OpenAlexW4281640136

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.