Evidence map›Paper›PMID 35668695›Full record

ArticleThe FEBS journal2022

Multiple detection of both attractants and repellents by the dCache-chemoreceptor SO_1056 of Shewanella oneidensis.

Anne Boyeldieu, Jean-Pierre Poli, Amine Ali Chaouche, Henri-Pierre Fierobe, Marie-Thérèse Giudici-Orticoni, Vincent Méjean, Cécile Jourlin-Castelli

Open access · hybridAbstract read
In one paragraph

Article in The FEBS journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
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  4. AnApplied and environmental microbiology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Anne BoyeldieuLaboratoire de Bioénergétique et Ingénierie des Protéines (BIP, UMR7281), Centre National de la Recherche Scientifique, Institut de Microbiologie de la Méditerranée (IMM), Institut Microbiologie, Bioénergies et Biotechnologie (IM2B), Aix Marseille Université, France.
Jean-Pierre PoliLaboratoire de Bioénergétique et Ingénierie des Protéines (BIP, UMR7281), Centre National de la Recherche Scientifique, Institut de Microbiologie de la Méditerranée (IMM), Institut Microbiologie, Bioénergies et Biotechnologie (IM2B), Aix Marseille Université, France.ORCID 0000-0002-1103-544X
Amine Ali ChaoucheLaboratoire de Bioénergétique et Ingénierie des Protéines (BIP, UMR7281), Centre National de la Recherche Scientifique, Institut de Microbiologie de la Méditerranée (IMM), Institut Microbiologie, Bioénergies et Biotechnologie (IM2B), Aix Marseille Université, France.
Henri-Pierre FierobeLaboratoire de Chimie Bactérienne (LCB, UMR7283), Centre National de la Recherche Scientifique, Institut de Microbiologie de la Méditerranée (IMM), Institut Microbiologie, Bioénergies et Biotechnologie (IM2B), Aix Marseille Université, France.
Marie-Thérèse Giudici-OrticoniLaboratoire de Bioénergétique et Ingénierie des Protéines (BIP, UMR7281), Centre National de la Recherche Scientifique, Institut de Microbiologie de la Méditerranée (IMM), Institut Microbiologie, Bioénergies et Biotechnologie (IM2B), Aix Marseille Université, France.
Vincent MéjeanLaboratoire de Bioénergétique et Ingénierie des Protéines (BIP, UMR7281), Centre National de la Recherche Scientifique, Institut de Microbiologie de la Méditerranée (IMM), Institut Microbiologie, Bioénergies et Biotechnologie (IM2B), Aix Marseille Université, France.
Cécile Jourlin-CastelliLaboratoire de Bioénergétique et Ingénierie des Protéines (BIP, UMR7281), Centre National de la Recherche Scientifique, Institut de Microbiologie de la Méditerranée (IMM), Institut Microbiologie, Bioénergies et Biotechnologie (IM2B), Aix Marseille Université, France.ORCID 0000-0001-8581-2590
Aix-Marseille Université · FRUniversité de Corse Pascal Paoli · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chemoreceptors are usually transmembrane proteins dedicated to the detection of compound gradients or signals in the surroundings of a bacterium. After detection, they modulate the activation of CheA-CheY, the core of the chemotactic pathway, to allow cells to move upwards or downwards depending on whether the signal is an attractant or a repellent, respectively. Environmental bacteria such as Shewanella oneidensis harbour dozens of chemoreceptors or MCPs (methyl-accepting chemotaxis proteins). A recent study revealed that MCP SO_1056 of S. oneidensis binds chromate. Here, we show that this MCP also detects an additional attractant (l-malate) and two repellents (nickel and cobalt). The experiments were performed in vivo by the agarose-in-plug technique after overproducing MCP SO_1056 and in vitro, when possible, by submitting the purified ligand-binding domain (LBD) of SO_1056 to a thermal shift assay (TSA) coupled to isothermal titration calorimetry (ITC). ITC assays revealed a K

Indexed as

ChemotaxisMalatesBacterial ProteinsMethyl-Accepting Chemotaxis ProteinsNickelShewanellaBacterial ProteinsMalatesmalic acidMethyl-Accepting Chemotaxis ProteinsNickelbacterial chemotaxischemoreceptorsdCache domainisothermal titration calorimetryligand bindingthermal shift assay

Identifiers

PMID35668695
PMCPMC9796306
OpenAlexW4281668515

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.