Evidence map›Paper›PMID 35668320›Full record

ArticleNature immunology2022

pH sensing controls tissue inflammation by modulating cellular metabolism and endo-lysosomal function of immune cells.

Xiangjun Chen, Alok Jaiswal, Zachary Costliow, Paula Herbst, Elizabeth A Creasey, Noriko Oshiro-Rapley, Mark J Daly, Kimberly L Carey, Daniel B Graham, Ramnik J Xavier

Open access · greenAbstract read
In one paragraph

Article in Nature immunology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
6.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 70 citations in OpenAlex.

  1. Review
  2. Article
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  5. Article
  6. Review
  7. Article
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  10. Article
  11. Review
  12. Article
  13. Article
  14. Control of Inflammatory Response by Tissue Microenvironment.bioRxiv : the preprint server for biology · 2025
    Article
  15. ASIC1a mediated nucleus pulposus cells pyroptosis and glycolytic crosstalk as a molecular basis for intervertebral disc degeneration.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2025
    Review
  16. Review
  17. Lactate and lactylation in intervertebral disc degeneration.Frontiers in molecular biosciences · 2025
    Review
  18. Article
  19. Article
  20. Survival Strategies ofAntibiotics (Basel, Switzerland) · 2024
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Xiangjun ChenBroad Institute of MIT and Harvard, Cambridge, MA, USA.
Alok JaiswalBroad Institute of MIT and Harvard, Cambridge, MA, USA.ORCID http://orcid.org/0000-0002-1910-4681
Zachary CostliowBroad Institute of MIT and Harvard, Cambridge, MA, USA.
Paula HerbstCenter for Computational and Integrative Biology, Massachusetts General Hospital, Boston, MA, USA.
Elizabeth A CreaseyBroad Institute of MIT and Harvard, Cambridge, MA, USA.
Noriko Oshiro-RapleyBroad Institute of MIT and Harvard, Cambridge, MA, USA.
Mark J DalyBroad Institute of MIT and Harvard, Cambridge, MA, USA.
Kimberly L CareyBroad Institute of MIT and Harvard, Cambridge, MA, USA.
Daniel B GrahamBroad Institute of MIT and Harvard, Cambridge, MA, USA.ORCID http://orcid.org/0000-0002-8403-8115
Ramnik J XavierBroad Institute of MIT and Harvard, Cambridge, MA, USA. xavier@molbio.mgh.harvard.edu.ORCID http://orcid.org/0000-0002-5630-5167
Broad Institute · USMassachusetts General Hospital · US

Funding

RP5: Chemical proteomic discovery of small-molecule probes for autophagy proteinsU19AI142784 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI VIRGIN, HERBERT W · 2019 to 2023
$36.9M
Pilot & Feasibility ProgramP30DK043351 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI RAYMOND T CHUNG · 1991 to 2026
$35.3M
Genetic and Pathway Analysis CoreU19AI109725 · NIAID · WASHINGTON UNIVERSITY · PI VIRGIN, HERBERT W · 2014 to 2018
$32.7M
Systematic dissection of gut cellular circuits [at single cell resolution]RC2DK114784 · NIDDK · BROAD INSTITUTE, INC. · PI ASHENBERG, ORR, GRAHAM, DANIEL BARTHOLOMEW · 2017 to 2021
$9.0M
Lysosome Homeostasis and Microbicidal Mechanisms in Innate ImmunityR01DK117263 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI XAVIER, RAMNIK J · 2018 to 2021
$2.4M
NIAID NIH HHS U19 AI109725NIAID NIH HHS U19 AI142784NIDDK NIH HHS P30 DK043351NIDDK NIH HHS R01 DK117263NIDDK NIH HHS RC2 DK114784
6 · The paper itself

Abstract

Extracellular acidification occurs in inflamed tissue and the tumor microenvironment; however, a systematic study on how pH sensing contributes to tissue homeostasis is lacking. In the present study, we examine cell type-specific roles of the pH sensor G protein-coupled receptor 65 (GPR65) and its inflammatory disease-associated Ile231Leu-coding variant in inflammation control. GPR65 Ile231Leu knock-in mice are highly susceptible to both bacterial infection-induced and T cell-driven colitis. Mechanistically, GPR65 Ile231Leu elicits a cytokine imbalance through impaired helper type 17 T cell (T

Indexed as

ColitisReceptors, G-Protein-CoupledAnimalsHydrogen-Ion ConcentrationInflammationLysosomesMiceTh17 CellsReceptors, G-Protein-Coupled

Identifiers

PMID35668320
PMCPMC9720675
OpenAlexW4281743474

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.