Evidence map›Paper›PMID 35666431›Full record

ArticleBrazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]2022

Quantification of infectious Human mastadenovirus in environmental matrices using PMAxx-qPCR.

Lorena da Graça Pedrosa de Macena, Joseane Simone de Oliveira Pereira, Jansen Couto da Silva, Fernando César Ferreira, Adriana Gonçalves Maranhão, Natália Maria Lanzarini, Marize Pereira Miagostovich

Open access · bronzeAbstract read
In one paragraph

Article in Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology], 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Lorena da Graça Pedrosa de MacenaLaboratory of Comparative and Environmental Virology, Oswaldo Cruz Institute, FIOCRUZ, Rio de Janeiro, Brazil. lorena.macena@aluno.fiocruz.br.ORCID http://orcid.org/0000-0003-1420-6010
Joseane Simone de Oliveira PereiraLaboratory of Comparative and Environmental Virology, Oswaldo Cruz Institute, FIOCRUZ, Rio de Janeiro, Brazil.
Jansen Couto da SilvaLaboratory of Comparative and Environmental Virology, Oswaldo Cruz Institute, FIOCRUZ, Rio de Janeiro, Brazil.
Fernando César FerreiraLaboratory of Comparative and Environmental Virology, Oswaldo Cruz Institute, FIOCRUZ, Rio de Janeiro, Brazil.
Adriana Gonçalves MaranhãoLaboratory of Comparative and Environmental Virology, Oswaldo Cruz Institute, FIOCRUZ, Rio de Janeiro, Brazil.
Natália Maria LanzariniLaboratory of Comparative and Environmental Virology, Oswaldo Cruz Institute, FIOCRUZ, Rio de Janeiro, Brazil.
Marize Pereira MiagostovichLaboratory of Comparative and Environmental Virology, Oswaldo Cruz Institute, FIOCRUZ, Rio de Janeiro, Brazil.
Fundação Oswaldo Cruz · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Molecular methodologies providing data on viral concentration and infectivity have been successfully used in environmental virology, supporting quantitative risk assessment studies. The present study aimed to assess human mastadenovirus (HAdV) intact particles using a derivative of propidium monoazide associated with qPCR (PMAxx-qPCR) in aquatic matrices. Initially, different concentrations of PMAxx were evaluated to establish an optimal protocol for treating different naturally contaminated matrices, using 10 min incubation in the dark at 200 rpm at room temperature and 15 min of photoactivation in the PMA-Lite™ LED photolysis device. There was no significant reduction in the quantification of infectious HAdV with increasing concentration of PMAxx used (20 μM, 50 μM, and 100 μM), except for sewage samples. In this matrix, a reduction of 5.01 log of genomic copies (GC)/L was observed from the concentration of 50 μM and revealed 100% HAdV particles with damaged capsids. On the other hand, the mean reduction of 0.51 log in stool samples using the same concentration mentioned above demonstrated 83% of damaged particles eliminated in the stool. Following, 50 μM PMAxx-qPCR protocol revealed a log reduction of 0.91, 0.67, and 1.05 in other samples of raw sewage, brackish, and seawater where HAdV concentration reached 1.47 × 10

Indexed as

MastadenovirusSewageHumansReal-Time Polymerase Chain ReactionSeawaterSewageBrackish waterHAdVPMAxx-qPCRPropidium monoazideRaw sewageSeawater

Identifiers

PMID35666431
PMCPMC9168632
OpenAlexW4281680371

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.