Evidence map›Paper›PMID 35663034›Full record

ArticleiScience2022

A catalog of 48,425 nonredundant viruses from oral metagenomes expands the horizon of the human oral virome.

Shenghui Li, Ruochun Guo, Yue Zhang, Peng Li, Fang Chen, Xifan Wang, Jing Li, Zhuye Jie, Qingbo Lv, Hao Jin and 2 more

Open access · goldAbstract read
In one paragraph

Article in iScience, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed, 1 pooled it
12.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 1 synthesis or guideline pooled it, 74 citations in OpenAlex.

  1. Pooled it
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  3. Oral virome in health and disease.Journal of the American Dental Association (1939) · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 3 countries.

Shenghui LiDepartment of Microbiology, College of Basic Medical Sciences, Dalian Medical University, Dalian 116044, China.
Ruochun GuoPuensum Genetech Institute, Wuhan 430076, China.
Yue ZhangPuensum Genetech Institute, Wuhan 430076, China.
Peng LiPuensum Genetech Institute, Wuhan 430076, China.
Fang ChenDepartment of Microbiology, College of Basic Medical Sciences, Dalian Medical University, Dalian 116044, China.
Xifan WangKey Laboratory of Precision Nutrition and Food Quality, Department of Nutrition and Health, China Agricultural University, Beijing 100083, China.
Jing LiDepartment of Rheumatology and Immunology, Peking University People's Hospital, Beijing 100044, China.
Zhuye JieLaboratory of Genomics and Molecular Biomedicine, Department of Biology, University of Copenhagen, 2100 Copenhagen, Denmark.
Qingbo LvPuensum Genetech Institute, Wuhan 430076, China.
Hao JinPuensum Genetech Institute, Wuhan 430076, China.
Guangyang WangDepartment of Microbiology, College of Basic Medical Sciences, Dalian Medical University, Dalian 116044, China.
Qiulong YanDepartment of Microbiology, College of Basic Medical Sciences, Dalian Medical University, Dalian 116044, China.
Dalian Medical University · CNChina Agricultural University · CNInner Mongolia Agricultural University · CNPeking University · CNUniversity of Copenhagen · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The human oral cavity is a hotspot of numerous, mostly unexplored, viruses that are important for maintaining oral health and microbiome homeostasis. Here, we analyzed 2,792 publicly available oral metagenomes and proposed the Oral Virus Database (OVD) comprising 48,425 nonredundant viral genomes (≥5 kbp). The OVD catalog substantially expanded the known phylogenetic diversity and host specificity of oral viruses, allowing for enhanced delineation of some underrepresented groups such as the predicted

Indexed as

MicrobiomeVirology

Identifiers

PMID35663034
PMCPMC9160773
OpenAlexW4280597187

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.