Evidence map›Paper›PMID 35661262›Full record

ArticleArchives of microbiology2022

An update on genetic analysis of porcine reproductive and respiratory syndrome virus type 2 (PRRSV-2) in South America: identification of ORF5 sequences of lineage 1A, 1C and 1G.

Natalia Ramos, Gabriela Betancour, Josefina Puig, Juan Arbiza

Abstract read
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In one paragraph

Article in Archives of microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Natalia RamosSección Virología, Facultad de Ciencias, Universidad de La República, Iguá 4225, 11400, Montevideo, Uruguay. nramos@fcien.edu.uy.ORCID http://orcid.org/0000-0003-1355-9463
Gabriela BetancourSección Virología, Facultad de Ciencias, Universidad de La República, Iguá 4225, 11400, Montevideo, Uruguay.
Josefina PuigSección Virología, Facultad de Ciencias, Universidad de La República, Iguá 4225, 11400, Montevideo, Uruguay.
Juan ArbizaSección Virología, Facultad de Ciencias, Universidad de La República, Iguá 4225, 11400, Montevideo, Uruguay.

Funding

Instituto Nacional de Investigacion Agropecuaria, Uruguay INIA-FPTA 321
6 · The paper itself

Abstract

Data regarding PRRSV-2 in South America are scant and a coordinated criterion for molecular characterization is needed. A phylogenetic analysis was performed using a dataset of 76 ORF5 sequences from South America, and results showed the identification of lineage 5 in the early 2000s and the predominance of lineage 1 at least since 2013. Lineage 1 sequences were further classified into sub-lineages according to a recent molecular characterization study of PRRSV-2 in United States. Our results revealed the recent identification in Uruguay of PRRSV-2 ORF5 sequences of lineage 1 sub-lineage C. Two additional sub-lineages were identified in South America, 1G in Chile and 1A in Peru. Continuous updating the molecular epidemiology of circulating viruses with coordinated investigations among countries is required to control and prevent the emergence of genetic variants of PRRSV-2.

Indexed as

Porcine Reproductive and Respiratory SyndromePorcine respiratory and reproductive syndrome virusAnimalsChileGenetic VariationMolecular EpidemiologyPhylogenySwineUnited StatesC and GLineage 1ORF5PRRSV-2South AmericaSub-lineage A

Identifiers

PMID35661262

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.