ArticleBMC genomics2022
Systematic analysis and expression profiles of TCP gene family in Tartary buckwheat (Fagopyrum tataricum (L.) Gaertn.) revealed the potential function of FtTCP15 and FtTCP18 in response to abiotic stress.
Article in BMC genomics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.
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Who cites it
13 citing papers in PubMed, 23 citations in OpenAlex.
- Genome-Wide Identification of the TCP Gene Family inBiology · 2026Article
- Article
- Effects of NaCl Treatment on Flavonoid Biosynthesis and Antioxidant System During Buckwheat Germination.Plants (Basel, Switzerland) · 2026Article
- Identification and characterization of TCP transcription factor GmTCP670 associated with soybean development.Scientific reports · 2025Article
- Genome-wide identification and expression analysis of the3 Biotech · 2025Article
- Genome-wide identification and functional analyses of the TCP gene family in Carthamus tinctorius L.Scientific reports · 2025Article
- Systematic Analysis of thePlants (Basel, Switzerland) · 2025Article
- Genome-Wide Characterization of the Heat Shock Transcription Factor Gene Family inInternational journal of molecular sciences · 2024Article
- CDPK protein in cotton: genomic-wide identification, expression analysis, and conferring resistance to heat stress.BMC plant biology · 2024Article
- Sweet cherry TCP gene family analysis reveals potential functions of PavTCP1, PavTCP2 and PavTCP3 in fruit light responses.BMC genomics · 2024Article
- Genome-wide identification and characterization of TCP gene family inFrontiers in plant science · 2024Article
- Transcriptome-Wide Identification of TCP Transcription Factor Family Members inInternational journal of molecular sciences · 2023Article
- Genomic survey of TCP transcription factors in plants: Phylogenomics, evolution and their biology.Frontiers in genetics · 2022Review
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Authors and funding
10 authors at 2 institutions in 1 country.
Funding
Abstract
backgroundAs transcription factors, the TCP genes are considered to be promising targets for crop enhancement for their responses to abiotic stresses. However, information on the systematic characterization and functional expression profiles under abiotic stress of TCPs in Tartary buckwheat (Fagopyrum tataricum (L.) Gaertn.) is limited.
resultsIn this study, we identified 26 FtTCPs and named them according to their position on the chromosomes. Phylogenetic tree, gene structure, duplication events, and cis-acting elements were further studied and syntenic analysis was conducted to explore the bioinformatic traits of the FtTCP gene family. Subsequently, 12 FtTCP genes were selected for expression analysis under cold, dark, heat, salt, UV, and waterlogging (WL) treatments by qRT-PCR. The spatio-temporal specificity, correlation analysis of gene expression levels and interaction network prediction revealed the potential function of FtTCP15 and FtTCP18 in response to abiotic stresses. Moreover, subcellular localization confirmed that FtTCP15 and FtTCP18 localized in the nucleus function as transcription factors.
conclusionsIn this research, 26 TCP genes were identified in Tartary buckwheat, and their structures and functions have been systematically explored. Our results reveal that the FtTCP15 and FtTCP18 have special cis-elements in response to abiotic stress and conserved nature in evolution, indicating they could be promising candidates for further functional verification under multiple abiotic stresses.
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