Evidence map›Paper›PMID 35654974›Full record

ArticleNature genetics2022

A phenotypic spectrum of autism is attributable to the combined effects of rare variants, polygenic risk and sex.

Danny Antaki, James Guevara, Adam X Maihofer, Marieke Klein, Madhusudan Gujral, Jakob Grove, Caitlin E Carey, Oanh Hong, Maria J Arranz, Amaia Hervas and 10 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nature genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 135 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
135citing papers in PubMed, 1 pooled it
22.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

135 citing papers in PubMed, 1 synthesis or guideline pooled it, 191 citations in OpenAlex.

  1. Does the Extreme Male Brain Hypothesis of Autism Apply More to Females Than Males? A Systematic and Meta-Analytic Approach.Autism research : official journal of the International Society for Autism Research · 2026
    Pooled it
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  18. Genetic confounding in the associations between maternal health and autism.medRxiv : the preprint server for health sciences · 2026
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75 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

20 authors at 7 institutions in 3 countries.

Danny Antaki *Biomedical Sciences Graduate Program, University of California San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0003-0381-7801
James Guevara *Beyster Center for Psychiatric Genomics, University of California San Diego, La Jolla, CA, USA.
Adam X MaihoferDepartment of Psychiatry, University of California San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0003-4517-1623
Marieke KleinBeyster Center for Psychiatric Genomics, University of California San Diego, La Jolla, CA, USA.
Madhusudan GujralBeyster Center for Psychiatric Genomics, University of California San Diego, La Jolla, CA, USA.
Jakob GroveDepartment of Biomedicine, Aarhus University, Aarhus, Denmark.ORCID http://orcid.org/0000-0003-2284-5744
Caitlin E CareyHarvard T.H. Chan School of Public Health, Broad Institute of the Massachusetts Institute of Technology and Harvard, Cambridge, MA, USA.
Oanh HongBeyster Center for Psychiatric Genomics, University of California San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0003-4196-4749
Maria J ArranzResearch Laboratory Unit, Fundacio Docencia i Recerca Mutua, Terrassa, Spain.ORCID http://orcid.org/0000-0002-6757-9198
Amaia HervasChild and Adolescent Mental Health Unit, Hospital Universitari Mútua de Terrassa, Barcelona, Spain.
Christina CorselloTEACCH Autism Program, University of North Carolina, Chapel Hill, NC, USA.
Keith K VauxHuman Longevity Inc., San Diego, CA, USA.
Alysson R MuotriDepartment of Cellular and Molecular Medicine, University of California San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0003-0867-2875
Lilia M IakouchevaDepartment of Psychiatry, University of California San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0002-4542-5219
Eric CourchesneDepartment of Neurosciences, University of California San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0002-3772-5799
Karen PierceDepartment of Neurosciences, University of California San Diego, La Jolla, CA, USA.
Joseph G GleesonInstitute for Genomic Medicine, University of California San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0002-6713-8018
Elise B RobinsonHarvard T.H. Chan School of Public Health, Broad Institute of the Massachusetts Institute of Technology and Harvard, Cambridge, MA, USA.
Caroline M NievergeltDepartment of Psychiatry, University of California San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0001-5766-8923
Jonathan SebatBeyster Center for Psychiatric Genomics, University of California San Diego, La Jolla, CA, USA. jsebat@ucsd.edu.ORCID http://orcid.org/0000-0002-9087-526X
University of California San Diego · USAutism Research Institute · USBroad Institute · USAarhus University · DKHuman Longevity (United States) · USMútua Terrassa · ESUniversity Hospital Mútua de Terrassa · ES

Funding

Training Program in Basic Clinical GeneticsT32GM008666 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HAMILTON, BRUCE A · 1998 to 2021
$8.6M
Psychiatric Genomics Consortium for PTSDR01MH106595 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI KARESTAN C KOENEN, Caroline M Nievergelt · 2016 to 2026
$8.4M
Expanding the accessible genetic architecture of autism by single molecule sequencingR01MH113715 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SEBAT, JONATHAN · 2017 to 2021
$4.1M
1/9: Dissecting the effects of genomic variants on nenriched for neuropsychiatric disorderseurobehavioral dimensions in CNVs U01MH119738 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI GUR, RAQUEL E · 2019 to 2023
$3.2M
Integrative functional genomic study of pathways impacted by recurrent autism CNVR01MH108528 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI IAKOUCHEVA, LILIA M, MUOTRI, ALYSSON R. · 2016 to 2020
$2.6M
Evaluating the effect of splicing mutations on isoform networks in autismR01MH109885 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI IAKOUCHEVA, LILIA M, MUOTRI, ALYSSON R. · 2016 to 2020
$2.5M
4/7 Psychiatric Genomics Consortium: Advancing Discovery and ImpactR01MH124847 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI NIEVERGELT, CAROLINE M, SEBAT, JONATHAN · 2021 to 2025
$2.1M
4/7 Psychiatric Genomics Consortium: Finding actionable variationU01MH109501 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SEBAT, JONATHAN · 2016 to 2020
$2.0M
4/9: Dissecting the effects of genomic variants on neurobehavioral dimensions in CNVs enriched for neuropsychiatric disordersU01MH119746 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SEBAT, JONATHAN · 2019 to 2023
$1.4M
A computational framework for predicting the impact of mutations in autismR01MH105524 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI IAKOUCHEVA, LILIA M, RADIVOJAC, PREDRAG · 2014 to 2016
$1.4M
Protein network of high risk copy number variants for psychiatric disordersR21MH104766 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI IAKOUCHEVA, LILIA M · 2014 to 2015
$421k
NIGMS NIH HHS T32 GM008666NIMH NIH HHS R01 MH105524NIMH NIH HHS R01 MH106595NIMH NIH HHS R01 MH108528NIMH NIH HHS R01 MH109885NIMH NIH HHS R01 MH113715NIMH NIH HHS R01 MH124847NIMH NIH HHS R21 MH104766NIMH NIH HHS U01 MH109501NIMH NIH HHS U01 MH119738NIMH NIH HHS U01 MH119746
6 · The paper itself

Abstract

The genetic etiology of autism spectrum disorder (ASD) is multifactorial, but how combinations of genetic factors determine risk is unclear. In a large family sample, we show that genetic loads of rare and polygenic risk are inversely correlated in cases and greater in females than in males, consistent with a liability threshold that differs by sex. De novo mutations (DNMs), rare inherited variants and polygenic scores were associated with various dimensions of symptom severity in children and parents. Parental age effects on risk for ASD in offspring were attributable to a combination of genetic mechanisms, including DNMs that accumulate in the paternal germline and inherited risk that influences behavior in parents. Genes implicated by rare variants were enriched in excitatory and inhibitory neurons compared with genes implicated by common variants. Our results suggest that a phenotypic spectrum of ASD is attributable to a spectrum of genetic factors that impact different neurodevelopmental processes.

Indexed as

Autism Spectrum DisorderAutistic DisorderChildFamilyFemaleGenetic Predisposition to DiseaseHumansMaleMultifactorial Inheritance

Identifiers

PMID35654974
PMCPMC9474668
OpenAlexW4281713460

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.