Evidence map›Paper›PMID 35653561›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2022

Antibody homotypic interactions are encoded by germline light chain complementarity determining region 2.

Brandon Leonard, Kannan Sankar, Matthew G Romei, Margaret J Tse, Nina Do, Yanli Yang, Wadim L Matochko, Jack Bevers, Sundeep Bollineni, Kiran Mukhyala and 2 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Joined at the hip: The role of light chain complementarity determining region 2 in antibody self-association.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  6. Antibody interfaces revealed through structural mining.Computational and structural biotechnology journal · 2022
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors.

Brandon LeonardDepartment of Antibody Engineering, Genentech Inc., South San Francisco, CA 94080.
Kannan SankarDepartment of Antibody Engineering, Genentech Inc., South San Francisco, CA 94080.ORCID 0000-0002-8917-9718
Matthew G RomeiDepartment of Antibody Engineering, Genentech Inc., South San Francisco, CA 94080.ORCID 0000-0001-6798-7493
Margaret J TseDepartment of Structural Biology, Genentech Inc., South San Francisco, CA 94080.
Nina DoDepartment of Antibody Engineering, Genentech Inc., South San Francisco, CA 94080.ORCID 0000-0002-6498-4032
Yanli YangDepartment of Antibody Engineering, Genentech Inc., South San Francisco, CA 94080.
Wadim L MatochkoDepartment of Antibody Engineering, Genentech Inc., South San Francisco, CA 94080.
Jack BeversDepartment of Antibody Engineering, Genentech Inc., South San Francisco, CA 94080.ORCID 0000-0002-9131-4173
Sundeep BollineniDepartment of Antibody Engineering, Genentech Inc., South San Francisco, CA 94080.
Kiran MukhyalaDepartment of Structural Biology, Genentech Inc., South San Francisco, CA 94080.
Kam Hon HoiDepartment of Antibody Engineering, Genentech Inc., South San Francisco, CA 94080.ORCID 0000-0003-4158-0446
Greg A LazarDepartment of Antibody Engineering, Genentech Inc., South San Francisco, CA 94080.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The utilization of avidity to drive and tune functional responses is fundamental to antibody biology and often underlies the mechanisms of action of monoclonal antibody drugs. There is increasing evidence that antibodies leverage homotypic interactions to enhance avidity, often through weak transient interfaces whereby self-association is coupled with target binding. Here, we comprehensively map the Fab–Fab interfaces of antibodies targeting DR5 and 4-1BB that utilize homotypic interaction to promote receptor activation and demonstrate that both antibodies have similar self-association determinants primarily encoded within a germline light chain complementarity determining region 2 (CDRL2). We further show that these determinants can be grafted onto antibodies of distinct target specificity to substantially enhance their activity. An expanded characterization of all unique germline CDRL2 sequences reveals additional self-association sequence determinants encoded in the human germline repertoire. Our results suggest that this phenomenon is unique to CDRL2, and is correlated with the less frequent antigen interaction and lower somatic hypermutation associated with this loop. This work reveals a previously unknown avidity mechanism in antibody native biology that can be exploited for the engineering of biotherapeutics.

Indexed as

Antibody AffinityComplementarity Determining RegionsGerm CellsDrug TherapyImmunoglobulin Fab FragmentsComplementarity Determining RegionsImmunoglobulin Fab Fragmentsantibody engineeringhomotypic interactionsreceptor agonism

Identifiers

PMID35653561
PMCPMC9191654
OpenAlexW4281769282

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.