Evidence map›Paper›PMID 35653559›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2022

Gene-rich X chromosomes implicate intragenomic conflict in the evolution of bizarre genetic systems.

Noelle Anderson, Kamil S Jaron, Christina N Hodson, Matthew B Couger, Jan Ševčík, Brooke Weinstein, Stacy Pirro, Laura Ross, Scott William Roy

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Article
  3. Genome research · 2025
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
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  10. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Noelle AndersonDepartment of Molecular and Cell Biology, University of California, Merced, CA 95343.ORCID 0000-0002-3127-9927
Kamil S JaronInstitute of Evolutionary Biology, School of Biological Sciences, University of Edinburgh, Edinburgh, EH9 3FL, United Kingdom.
Christina N HodsonInstitute of Evolutionary Biology, School of Biological Sciences, University of Edinburgh, Edinburgh, EH9 3FL, United Kingdom.ORCID 0000-0001-5400-6107
Matthew B CougerDepartment of Thoracic Surgery, Brigham and Women's Hospital, Boston, MA 02115.
Jan ŠevčíkDepartment of Biology and Ecology, Faculty of Science, University of Ostrava, Ostrava, Czech Republic.ORCID 0000-0001-7174-593X
Brooke WeinsteinDepartment of Molecular and Cell Biology, University of California, Merced, CA 95343.
Stacy PirroIridian Genomes, Inc., Bethesda, MD 20817.
Laura RossInstitute of Evolutionary Biology, School of Biological Sciences, University of Edinburgh, Edinburgh, EH9 3FL, United Kingdom.
Scott William RoyDepartment of Molecular and Cell Biology, University of California, Merced, CA 95343.ORCID 0000-0001-7354-6459

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Haplodiploidy and paternal genome elimination (HD/PGE) are common in invertebrates, having evolved at least two dozen times, all from male heterogamety (i.e., systems with X chromosomes). However, why X chromosomes are important for the evolution of HD/PGE remains debated. The Haploid Viability Hypothesis posits that X-linked genes promote the evolution of male haploidy by facilitating purging recessive deleterious mutations. The Intragenomic Conflict Hypothesis holds that conflict between genes drives genetic system turnover; under this model, X-linked genes could promote the evolution of male haploidy due to conflicts with autosomes over sex ratios and genetic transmission. We studied lineages where we can distinguish these hypotheses: species with germline PGE that retain an XX/X0 sex determination system (gPGE+X). Because evolving PGE in these cases involves changes in transmission without increases in male hemizygosity, a high degree of X linkage in these systems is predicted by the Intragenomic Conflict Hypothesis but not the Haploid Viability Hypothesis. To quantify the degree of X linkage, we sequenced and compared 7 gPGE+X species’ genomes with 11 related species with typical XX/XY or XX/X0 genetic systems, representing three transitions to gPGE. We find highly increased X linkage in both modern and ancestral genomes of gPGE+X species compared to non-gPGE relatives and recover a significant positive correlation between percent X linkage and the evolution of gPGE. These empirical results substantiate longstanding proposals for a role for intragenomic conflict in the evolution of genetic systems such as HD/PGE.

Indexed as

GenomeSex Determination ProcessesX ChromosomeAnimalsDiploidyEvolution, MolecularHaploidyMalegenomic conflicthaplodiploidyinsectssex chromosomessex determination

Identifiers

PMID35653559
PMCPMC9191650

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.