Evidence map›Paper›PMID 35651745›Full record

ArticlePeerJ2022

Proteomic analysis of differential anther development from sterile/fertile lines in

Hongxia Pei, Hua Xie, Xuemei Wang, Xiujuan Yan, Baike Wang, Haiping Feng, Yunxia Zhao, Jingxia Gao, Jie Gao

Open access · goldAbstract read
In one paragraph

Article in PeerJ, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Hongxia PeiCollege of Horticulture, Xinjiang Agricultural University, Urumqi, China.
Hua XieInstitute of Horticulture Crops, Ningxia Academy of Agriculture and Forestry Sciences, Yinchuan, China.
Xuemei WangInstitute of Horticulture Crops, Ningxia Academy of Agriculture and Forestry Sciences, Yinchuan, China.
Xiujuan YanInstitute of Horticulture Crops, Ningxia Academy of Agriculture and Forestry Sciences, Yinchuan, China.
Baike WangInstitute of Horticulture Crops, Xinjiang Academy of Agricultural Sciences, Urumqi, China.
Haiping FengInstitute of Horticulture Crops, Ningxia Academy of Agriculture and Forestry Sciences, Yinchuan, China.
Yunxia ZhaoInstitute of Horticulture Crops, Ningxia Academy of Agriculture and Forestry Sciences, Yinchuan, China.
Jingxia GaoInstitute of Horticulture Crops, Ningxia Academy of Agriculture and Forestry Sciences, Yinchuan, China.
Jie GaoCollege of Horticulture, Xinjiang Agricultural University, Urumqi, China.
Ningxia Academy of Agriculture and Forestry Sciences · CNXinjiang Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Pepper ( Objectives: In this study, we identified many crucial factors and important components in metabolic pathways in anther and pollen development, and elucidated the molecular mechanism related to pollen abortion in pepper. Methods: Pepper pollen was observed at different stages to detect the characteristics associated with male sterility and fertility. The phytohormone and oxidoreductase activities were detected in spectrophotometric and redox reaction assays, respectively. Proteins were extracted from male sterile and fertile pepper lines, and identified by TMT/iTRAQ (tandem mass tags/isobaric tags for relative and absolute quantitation) and LC-MS/MS (liquid chromatograph-mass spectrometer) analysis. Differentially abundant proteins (DAPs) were analyzed based on Gene Ontology annotations and the Kyoto Encyclopedia of Genes and Genomes database according to |fold change)| > 1.3 and Results: In this study, we screened and identified one male sterile pepper line with abnormal cytological characteristics in terms of pollen development. The peroxidase and catalase enzyme activities were significantly reduced and increased, respectively, in the male sterile line compared with the male fertile line. Phytohormone analysis demonstrated that the gibberellin, jasmonic acid, and auxin contents changed by different extents in the male sterile pepper line. Proteome analysis screened 1,645 DAPs in six clusters, which were mainly associated with the chloroplast and cytoplasm based on their similar expression levels. According to proteome analysis, 45 DAPs were quantitatively identified in the meiosis, tetrad, and binucleate stages by PRM, which were related to monoterpenoid biosynthesis, and starch and sucrose metabolism pathways. Conclusions: We screened 1,645 DAPs by proteomic analysis and 45 DAPs were related to anther and pollen development in a male sterile pepper line. In addition, the activities of peroxidase and catalase as well as the abundances of phytohormones such as gibberellin, jasmonic acid, and auxin were related to male sterility. The results obtained in this study provide insights into the molecular mechanism responsible for male sterility and fertility in pepper.

Indexed as

CapsicumPlant InfertilityCatalaseChromatography, LiquidCyclopentanesGibberellinsOxylipinsPlant Growth RegulatorsProteomeProteomicsTandem Mass SpectrometryCatalaseCyclopentanesGibberellinsjasmonic acidOxylipinsPlant Growth RegulatorsProteomeMale sterilityParallel reaction monitoring (PRM)Pepper (Capsicum annuum L.)PhytohormoneProteasome

Identifiers

PMID35651745
PMCPMC9150696
OpenAlexW4281774710

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.