Evidence map›Paper›PMID 35648767›Full record

ArticlePloS one2022

A Borrelia burgdorferi outer surface protein C (OspC) genotyping method using Luminex technology.

Patrick Pearson, Olivia Skaltsis, Chu-Yuan Luo, Guang Xu, Zachary Oppler, Dustin Brisson, Stephen M Rich

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.4field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Differential Resistance ofPathogens (Basel, Switzerland) · 2023
    Article
  7. Review
  8. White-Tailed Deer Serum Kills the Lyme Disease Spirochete,Vector borne and zoonotic diseases (Larchmont, N.Y.) · 2023
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Patrick PearsonLaboratory of Medical Zoology, Department of Microbiology, University of Massachusetts, Amherst, Massachusetts, United States of America.
Olivia SkaltsisNH Citizens Health Initiative, Institute for Health Policy and Practice, University of New Hampshire, Concord, New Hampshire, United States of America.
Chu-Yuan LuoLaboratory of Medical Zoology, Department of Microbiology, University of Massachusetts, Amherst, Massachusetts, United States of America.
Guang XuLaboratory of Medical Zoology, Department of Microbiology, University of Massachusetts, Amherst, Massachusetts, United States of America.
Zachary OpplerEvolution and Ecology Disease Systems Laboratory, Department of Biology, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.
Dustin BrissonEvolution and Ecology Disease Systems Laboratory, Department of Biology, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.
Stephen M RichLaboratory of Medical Zoology, Department of Microbiology, University of Massachusetts, Amherst, Massachusetts, United States of America.ORCID 0000-0001-7175-6380
University of Massachusetts Amherst · USUniversity of Pennsylvania · USUniversity of New Hampshire · US

Funding

Phylogeographic dynamics of tick-borne pathogensR01AI142572 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI BRISSON, DUSTIN · 2018 to 2023
$2.4M
NIAID NIH HHS R01 AI142572
6 · The paper itself

Abstract

Borrelia burgdorferi is an important tickborne human pathogen comprising several strains based on nucleotide sequence of the outer surface protein C (ospC) gene. Detection and characterization of different ospC genotypes is vital for research on B. burgdorferi and the risk it poses to humans. Here we present a novel, multiplex assay based on Luminex xMAP technology for the detection of B. burgdorferi ospC genotypes. The assay has five major steps: amplification of the ospC gene, hydrolyzation of surplus primers and nucleotides, incorporation of biotinylated nucleotides into the template DNA, hybridization to Luminex microspheres, and detection of fluorescent signals corresponding to each ospC genotype. We validated the protocol by comparing results obtained from our method against results from an established ospC genotyping method. This protocol can be used for the characterization of ospC genotypes in B. burgdorferi infected ticks, reservoir hosts, and/or clinical samples.

Indexed as

Borrelia burgdorferiAntigens, BacterialBacterial Outer Membrane ProteinsDNA PrimersGenotypeHumansTechnologyAntigens, BacterialBacterial Outer Membrane ProteinsDNA PrimersOspC protein

Identifiers

PMID35648767
PMCPMC9159548
OpenAlexW4281669409

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.