Evidence map›Paper›PMID 35646079›Full record

ArticleFrontiers in genetics2022

The Landscape of the Tumor-Infiltrating Immune Cell and Prognostic Nomogram in Colorectal Cancer.

Jiateng Zhong, Yu Qin, Pei Yu, Weiyue Xia, Baoru Gu, Xinlai Qian, Yuhan Hu, Wei Su, Zheying Zhang

Open access · goldAbstract read
In one paragraph

Article in Frontiers in genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Jiateng ZhongDepartment of Pathology, The First Affiliated Hospital of Xinxiang Medical University, Xinxiang, China.
Yu QinDepartment of Pathology, The First Affiliated Hospital of Xinxiang Medical University, Xinxiang, China.
Pei YuDepartment of Pathology, Xinxiang Medical University, Xinxiang, China.
Weiyue XiaDepartment of Pathology, Xinxiang Medical University, Xinxiang, China.
Baoru GuDepartment of Pathology, Xinxiang Medical University, Xinxiang, China.
Xinlai QianDepartment of Pathology, Xinxiang Medical University, Xinxiang, China.
Yuhan HuDepartment of Pathology, Xinxiang Medical University, Xinxiang, China.
Wei SuDepartment of Pathology, The First Affiliated Hospital of Xinxiang Medical University, Xinxiang, China.
Zheying ZhangDepartment of Pathology, The First Affiliated Hospital of Xinxiang Medical University, Xinxiang, China.
Xinxiang Medical University · CNFirst Affiliated Hospital of Xinxiang Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tumor-infiltrating immune cells are associated with prognosis and immunotherapy targets in colorectal cancer (CRC). The recently developed CIBERSORT method allows immune cell analysis by deconvolution of high-throughput data onto gene expression. In this study, we analyzed the relative proportions of immune cells in GEO (94 samples) and TCGA (522 samples) CRC data based on the CIBERSORT method. A total of 22 types of tumor-infiltrating immune cells were evaluated. Combined with GEO and TCGA data, it was found that naive B cells, M2 macrophages, and resting mast cells were highly expressed in normal tissues, while M0 macrophages, M1 macrophages, activated mast cells, and neutrophils were highly expressed in tumors. Moreover, we constructed a prognostic model by infiltrating immune cells that showed high specificity and sensitivity in both the training (AUC of 5-year survival = 0.699) and validation (AUC of 5-year survival = 0.844) sets. This provides another basis for clinical prognosis. The results of multiple immunofluorescence detection showed that there were differences in the results of bioinformatics analysis. Neutrophils were highly expressed in normal tissues, and M2 macrophages were highly expressed in tumor tissues. Collectively, our data suggested that infiltrating immune cells in CRC may be an important determinant of prognosis and immunotherapy.

Indexed as

CIBERSORTcolorectal cancerimmunotherapynomogramprognosis

Identifiers

PMID35646079
PMCPMC9133796
OpenAlexW4280593569

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.