Evidence map›Paper›PMID 35644031›Full record

ArticleArthritis & rheumatology (Hoboken, N.J.)2022

Longitudinal Immune Cell Profiling in Patients With Early Systemic Lupus Erythematosus.

Takanori Sasaki, Sabrina Bracero, Joshua Keegan, Lin Chen, Ye Cao, Emma Stevens, Yujie Qu, Guoxing Wang, Jennifer Nguyen, Jeffrey A Sparks and 5 more

Open access · greenAbstract read
In one paragraph

Article in Arthritis & rheumatology (Hoboken, N.J.), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
11.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 61 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 1 country.

Takanori SasakiBrigham and Women's Hospital and Harvard Medical School, Boston, Massachusetts.ORCID 0000-0001-9720-0698
Sabrina BraceroBrigham and Women's Hospital and Harvard Medical School, Boston, Massachusetts.
Joshua KeeganBrigham and Women's Hospital and Harvard Medical School, Boston, Massachusetts.
Lin ChenBrigham and Women's Hospital and Harvard Medical School, Boston, Massachusetts.ORCID 0000-0001-5072-4152
Ye CaoBrigham and Women's Hospital and Harvard Medical School, Boston, Massachusetts.
Emma StevensBrigham and Women's Hospital and Harvard Medical School, Boston, Massachusetts.
Yujie QuMerck Sharp & Dohme, Kenilworth, New Jersey.
Guoxing WangMerck Sharp & Dohme, Kenilworth, New Jersey.
Jennifer NguyenBrigham and Women's Hospital and Harvard Medical School, Boston, Massachusetts.
Jeffrey A SparksBrigham and Women's Hospital and Harvard Medical School, Boston, Massachusetts.ORCID 0000-0002-5556-4618
V Michael HolersDivision of Rheumatology, University of Colorado School of Medicine, Aurora, Colorado.
Stephen E AlvesMerck Sharp & Dohme, Kenilworth, New Jersey.
James A LedererBrigham and Women's Hospital and Harvard Medical School, Boston, Massachusetts.
Karen H CostenbaderBrigham and Women's Hospital and Harvard Medical School, Boston, Massachusetts.ORCID 0000-0002-8972-9388
Deepak A RaoBrigham and Women's Hospital and Harvard Medical School, Boston, Massachusetts.ORCID 0000-0001-9672-7746
Brigham and Women's Hospital · USMerck & Co., Inc., Rahway, NJ, USA (United States) · USUniversity of Colorado Denver · US

Funding

VERITY: Value and Evidence in Rheumatology using bioInformaTics, and advanced analYticsP30AR072577 · NIAMS · BRIGHAM AND WOMEN'S HOSPITAL · PI Daniel Hal Solomon · 2017 to 2026
$9.8M
Joint Biology Consortium Resource-based CenterP30AR070253 · NIAMS · BRIGHAM AND WOMEN'S HOSPITAL · PI Peter A Nigrovic, Jeffrey Andrew Sparks · 2016 to 2026
$9.4M
Rheumatoid Arthritis-Related Autoantibodies, Articular Inflammation, and RA-Associated Interstitial Lung DiseaseR01AR077607 · NIAMS · BRIGHAM AND WOMEN'S HOSPITAL · PI SPARKS, JEFFREY ANDREW · 2021 to 2025
$3.7M
Cardiovascular Disease Epidemiology in Patients with LupusK24AR066109 · NIAMS · BRIGHAM AND WOMEN'S HOSPITAL · PI COSTENBADER, KAREN H · 2014 to 2023
$1.7M
Molecular control of CD4 T cell ability to help B cellsK08AR072791 · NIAMS · BRIGHAM AND WOMEN'S HOSPITAL · PI RAO, DEEPAK ANGARA · 2018 to 2022
$764k
Doris Duke Charitable Foundation 2019092NIAMS NIH HHS K08 AR072791NIAMS NIH HHS K24 AR066109NIAMS NIH HHS P30 AR070253NIAMS NIH HHS P30 AR072577NIAMS NIH HHS R01 AR077607
6 · The paper itself

Abstract

objectivesTo investigate the immune cell profiles of patients with systemic lupus erythematosus (SLE), and to identify longitudinal changes in those profiles over time.

methodsWe employed mass cytometry with 3 different panels of 38-39 markers (an immunophenotyping panel, a T cell/monocyte panel, and a B cell panel) in cryopreserved peripheral blood mononuclear cells (PBMCs) from 9 patients with early SLE, 15 patients with established SLE, and 14 controls without autoimmune disease. We used machine learning-driven clustering, flow self-organizing maps, and dimensional reduction with t-distributed stochastic neighbor embedding to identify unique cell populations in early SLE and established SLE. We used mass cytometry data of PBMCs from 19 patients with early rheumatoid arthritis (RA) and 23 controls to compare levels of specific cell populations in early RA and SLE. For the 9 patients with early SLE, longitudinal mass cytometry analysis was applied to PBMCs at enrollment, 6 months after enrollment, and 1 year after enrollment. Serum samples were also assayed for 65 cytokines using Luminex multiplex assay, and associations between cell types and cytokines/chemokines were assessed.

resultsLevels of peripheral helper T cells, follicular helper T (Tfh) cells, and several Ki-67+ proliferating subsets (ICOS+Ki-67+ CD8 T cells, Ki-67+ regulatory T cells, CD19

conclusionTwo major helper T cell subsets and unique Ki-67+ proliferating immune cell subsets were expanded in patients in the early phase of SLE, and the immunologic features characteristic of early SLE evolved over time.

Indexed as

Leukocytes, MononuclearLupus Erythematosus, SystemicCytokinesHumansInterleukinsKi-67 AntigenCytokinesInterleukinsKi-67 Antigen

Identifiers

PMID35644031
PMCPMC10238884
OpenAlexW4282939281

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.