Evidence map›Paper›PMID 35641994›Full record

ArticleBMC medical genomics2022

How does re-classification of variants of unknown significance (VUS) impact the management of patients at risk for hereditary breast cancer?

Ava Kwong, Cecilia Yuen Sze Ho, Vivian Yvonne Shin, Chun Hang Au, Tsun-Leung Chan, Edmond Shiu Kwan Ma

Abstract read
In one paragraph

Article in BMC medical genomics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Reclassification ofBiomolecules & biomedicine · 2026
    Article
  2. Not Forgotten: Patient Experiences with Genetic Variant Reclassifications.medRxiv : the preprint server for health sciences · 2026
    Article
  3. Review
  4. Article
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  7. Review
  8. Article
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  10. Review
  11. Genes · 2024
    Article
  12. Assessment ofJCO clinical cancer informatics · 2024
    Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Ava KwongChief of Breast Surgery Division, Department of Surgery, The University of Hong Kong and University of Hong Kong-Shenzhen Hospital, Pokfulam, Hong Kong SAR. akwong@asiabreastregistry.com.
Cecilia Yuen Sze HoDepartment of Molecular Pathology, Hong Kong Sanatorium & Hospital, Happy Valley, Hong Kong SAR.
Vivian Yvonne ShinChief of Breast Surgery Division, Department of Surgery, The University of Hong Kong and University of Hong Kong-Shenzhen Hospital, Pokfulam, Hong Kong SAR.
Chun Hang AuDepartment of Molecular Pathology, Hong Kong Sanatorium & Hospital, Happy Valley, Hong Kong SAR.
Tsun-Leung ChanHong Kong Hereditary Breast Cancer Family Registry, Shau Kei Wan, Hong Kong SAR.
Edmond Shiu Kwan MaHong Kong Hereditary Breast Cancer Family Registry, Shau Kei Wan, Hong Kong SAR.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe popularity of multigene testing increases the probability of identifying variants of uncertain significance (VUS). While accurate variant interpretation enables clinicians to be better informed of the genetic risk of their patients, currently, there is a lack of consensus management guidelines for clinicians on VUS.

methodsAmong the BRCA1 and BRCA2 mutations screening in 3,544 subjects, 236 unique variants (BRCA1: 86; BRCA2: 150) identified in 459 patients were being reviewed. These variants consist of 231 VUS and 5 likely benign variants at the initial classification.

resultsThe variants in 31.8% (146/459) patients were reclassified during the review, which involved 26 unique variants (11.0%). Also, 31 probands (6.8%) and their family members were offered high-risk surveillance and related management after these variants were reclassified to pathogenic or likely pathogenic. At the same time, 69 probands (15%) had their VUS downgraded to cancer risk equivalent to the general population level.

conclusionA review of archival variants from BRCA1 and BRCA2 genetic testing changed the management for 31.8% of the families due to increased or reduced risk. We encourage regular updates of variant databases, reference to normal population and collaboration between research laboratories on functional studies to define the clinical significances of VUS better.

Indexed as

Breast NeoplasmsOvarian NeoplasmsFemaleGenetic Predisposition to DiseaseGenetic TestingHumansBreast cancer riskHereditary breast cancerVariants of uncertain significance

Identifiers

PMID35641994
PMCPMC9158111

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.