Evidence map›Paper›PMID 35641933›Full record

ArticleBMC genomic data2022

Comparative transcriptome analysis of heat-induced domesticated zebrafish during gonadal differentiation.

Chenchen Wang, Xuhuai Chen, Yu Dai, Yifei Zhang, Yuandong Sun, Xiaojuan Cui

Open access · goldAbstract read
In one paragraph

Article in BMC genomic data, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Chenchen WangSchool of Life and Health Science, Hunan University of Science and Technology, Xiangtan, 411201, Hunan, China.
Xuhuai ChenSchool of Life and Health Science, Hunan University of Science and Technology, Xiangtan, 411201, Hunan, China.
Yu DaiSchool of Life and Health Science, Hunan University of Science and Technology, Xiangtan, 411201, Hunan, China.
Yifei ZhangSchool of Life and Health Science, Hunan University of Science and Technology, Xiangtan, 411201, Hunan, China.
Yuandong SunSchool of Life and Health Science, Hunan University of Science and Technology, Xiangtan, 411201, Hunan, China.
Xiaojuan CuiSchool of Life and Health Science, Hunan University of Science and Technology, Xiangtan, 411201, Hunan, China. xjcui@hnust.edu.cn.
Hunan University of Science and Technology · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe influence of environmental factors, especially temperature, on sex ratio is of great significance to elucidate the mechanism of sex determination. However, the molecular mechanisms by which temperature affects sex determination remains unclear, although a few candidate genes have been found to play a role in the process. In this study, we conducted transcriptome analysis of the effects induced by high temperature on zebrafish during gonad differentiation period.

resultsTotals of 1171, 1022 and 2921 differentially expressed genes (DEGs) between high temperature and normal temperature were identified at 35, 45 and 60 days post-fertilization (dpf) respectively, revealing that heat shock proteins (HSPs) and DNA methyltransferases (DNMTs) were involved in the heat-exposed sex reversal. The Gene Ontology (GO) terms and the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway that were enriched in individuals after heat treatment included Fanconi anemia (FA) pathway, cell cycle, oocyte meiosis and homologous recombination.

conclusionsOur study provides the results of comparative transcriptome analyses between high temperature and normal temperature, and reveals that the molecular mechanism of heat-induced masculinization in zebrafish is strongly related to the expression of HSPs and DNMTs and FA pathway during gonad differentiation.

Indexed as

Fanconi AnemiaZebrafishAnimalsGene Expression ProfilingGene OntologyGonadsTranscriptomeFA pathwayGonad differentiationHeat stressTranscriptomeZebrafish

Identifiers

PMID35641933
PMCPMC9158171
OpenAlexW4281720618

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.